Prunus avium (sweet cherry): 110762709
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Entry
110762709 CDS
T05161
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110762709
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
110762709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
110762709
NCBI-ProteinID:
XP_021821070
UniProt:
A0A6P5SW62
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MDQNQRSSSSSASASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVVA
LNRELPPRNEQFLLDFEQLQSQFPDQDQLRVVTESVLISLVVQCSNHAPRAEFLLFALRS
LCTIGHINWDSFLPSLLSSVSAAEMSVGQGSQAMPAVSSQSGMLQSSNNIPHSSNFQSSN
PASPLPAVHGIGSPGQSAIEPSSCVTMSPVKSSDMPCNGQQATARVNSSIRDNAISSLRQ
LCCKIILTGLEFNLKPVTHADIFSHMLNWLVNWDQKQLGVDESDGVKSWRPGKALIEWLH
SCLDVIWLLVDEDKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMAMHMKML
DQHLHCPTFGTHRIFSQTTPSVSGEAVASLRYSPITYPSVLGEPLHGEDLATSIPKGSLD
WERALRCIRHALCTTPSPDWWKRVLLVAPCYRSPSQGPTPGAVFTSEMICEGTIDRIVEL
LKLTNSDINCWQEWLVFSDIFFFLIKSGCVDFVDFVDKLVSRLTEGDQLILKTNHVTWLL
AQIIRVELVMSALNADARKVETTRKILSFHKEDRSSDPNSPQSILLDFISSCQNLRIWSL
NTTTREYLNNEQLQKGKQIDEWWRQASKGDRMVDYMNMDDRSIGMFWVVSYTMAQPACET
VINWLSAAGVAESLPGTNLQSNERLMVMREVSPLPMSLLSGFSINLCLKLAYQMEESLFS
GQVVPSIAMAETYTRLLLIAPHSLFRSHFSHLAQRNPSVLSKPGVTLLVLEILNYRLLPL
YRYQGKSKALMYDVTKIISALKSKRGDHRVFRLAENLCMNLILSLRDFFLVKREGKGPTE
FTETLNRITVVTLAIIIKTRGIADADHLVYLQTMLEQILATSEHTWSDETLRFFPPLLRD
FLIPRIDKRGLAIQAWQQAETTVINQCTQLLSPSADPTYVMTYISHSFPQHRKYLCAGAW
ILMQGHPENINSVNLARVLREFSPEEVTHNIYTMVDVLLHHIQLELQHGHSLQDLLLKAC
ANLAFYIWTHELLPLDILLLALIDRDDDPHALRIVMSLLDRQELQQRVKLYCMNRGPPEH
WIYSGVFKRVELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLIVYRLIENDAKDSAERV
LAMYSQFLAYHPLRFTFVRDILAYFYGHLPVKLIVRILNGLDINKIPFSESFPSHVNSSN
SAMCPPPDYFATLLLGLVNNVIPPLHNNSKSGSVSDALNNSMRAPPNKTPATSQSGQTNV
SDGQKAFYQIQDPGTYTQLVLETAVIELLSLPVSASQIVSSLVQIVVNIQPTLIQSSNGL
HGAPNGVGQSSVLPTSPSGGSTDSLGTSRSTASVSGINASNFVSRSGYTCQQLSCLLIQA
CGLLLAQLPSDFHVQLYIEASRIIKETWWLTDGKRSLGELDSAVGYALLDPTWAAQDNTS
TAIGNIVALLHSFFSNLPQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMSPLLPRLANAHT
LFSKTLSLILSMMVDVFGKNTQPPTPVEPLEIADLIDFFHHIIHYEGQGGPVQANSKPRP
EVLSLCGRAAESLRPDIQHLLFHLKPDTNSSIYAATHPKLVQNAS
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagagatcatcatcgtcctcagcatcagcttcccgagcttaccagttc
caccccgcacgtgctgcaattgtcaatctattcgacctctacttaggaagaagtagtcgc
caaaagcctgaggattcagttcgagaacctccgaacaagtcacagaagcgtgtagttgct
cttaatagggagcttcctcctcgaaatgagcagttccttctagattttgagcaactgcag
agccagtttcctgaccaagatcaactgcgtgttgtgacagagtctgttcttatatctcta
gttgtgcagtgtagtaatcatgcgccgcgggcagaatttcttctttttgctttaaggagc
ttgtgcactataggtcacattaactgggatagctttttgccctcccttctttcttcagtc
tccgctgcagaaatgtcagtgggtcaagggagtcaagcaatgcctgctgtttcatcacag
tccggtatgcttcaatcttcaaataacattcctcattcgtctaattttcaatcttcaaat
cccgcctctccattacctgcggtacatggtattggttccccaggccagtctgctattgag
ccatcatcttgtgtaactatgtcaccagttaaatcatctgatatgccctgcaatggacag
caggcgacggcaagagtcaattcatctataagagataatgctataagcagtctacgtcag
ctgtgttgcaagattattttaactggacttgaatttaatttaaaaccagtaactcatgct
gacatcttttcccatatgctgaattggctggttaattgggatcaaaaacaactgggggtt
gatgaatctgatggtgtaaaatcctggagacctggcaaggctctaattgaatggctacat
agctgtttggatgtgatatggcttttggttgatgaggataaatgccgagtgcccttctat
gaattactgcgcagtggcttgcaatttatggagaatatacctgatgatgaagccttattt
actctaattttggagatccataggaggcgagatatgatggctatgcacatgaaaatgcta
gatcaacacctacattgccctacatttgggactcatcggattttctcacagacaactcct
agtgtttcaggtgaagcagtagcgagcttgcgatattcaccaattacatacccaagtgtt
cttggagaaccattgcacggagaggatcttgcaacttcaattccaaaaggaagtttggat
tgggagagagcgttgcgttgtataaggcatgctctttgcactactccatctcctgactgg
tggaaacgcgtgctgcttgtagccccttgctataggtctccttctcaagggcctactcct
ggtgctgttttcacttctgaaatgatttgtgagggaacaattgataggattgttgagcta
ttgaaattgacaaattcagatattaattgctggcaagagtggcttgtcttttcagatata
ttcttttttcttataaaaagcggatgtgttgattttgttgattttgtggacaagctagtt
tcacgccttacagagggtgatcaacttattcttaagacaaatcatgtcacttggcttctt
gctcaaattattcgggttgagcttgtgatgagtgcactaaatgcagatgctagaaaggtc
gagacgacccgaaagatcctatcgtttcataaagaagatagaagctcagatccgaatagt
cctcagagtatcctgcttgacttcataagcagttgccagaatttacgtatttggtcgttg
aacacgacaactagagaatatctgaataacgagcagcttcagaaaggaaagcaaatagat
gaatggtggaggcaagcaagcaaaggggatcgaatggtggattatatgaatatggatgat
aggtcaattgggatgttttgggttgtgtcttacaccatggcgcagccagcttgtgaaact
gtgatcaattggttatcagctgctggagttgctgagtcattaccaggaacaaacctacag
tccaatgagaggttaatggttatgcgggaagtaagtccattgccgatgtcattgttatct
ggcttttcaataaacctatgtttgaagctggcgtatcaaatggaagaatctttattttct
ggccaggttgtacctagtattgcaatggctgaaacatatactaggctgctactcattgca
cctcattcattatttcgttctcatttcagtcatttggcacaaaggaacccgtcggtattg
agcaagccaggcgtaactcttttggtgcttgaaattttgaattaccgtttgcttccactt
tacaggtaccaaggaaaaagcaaagccttgatgtatgatgttacgaaaatcatttctgct
ctaaaatcgaaacgtggagaccatcgtgtatttagattggccgagaacttgtgcatgaat
ctaattctgtctttgagagattttttcttggtgaaaagggaagggaagggtccaaccgaa
ttcacagaaactttgaatcgaataactgttgtcactcttgctatcatcattaagacacga
ggaattgctgatgctgatcatctggtttatcttcaaaccatgttagagcagatattagcc
actagtgaacacacatggtcagatgaaacactacgctttttccctcctcttcttcgtgat
ttcttgattcctcggatagataaaaggggtttggcaattcaagcatggcagcaggcggaa
accactgtgattaaccaatgcacccagcttttgtcaccatcagctgatcctacttatgtt
atgacctatatcagtcatagttttcctcaacaccgaaaatatctatgtgctggtgcatgg
atcctgatgcaagggcacccagaaaacattaacagtgtaaatttggcacgtgtcttgaga
gagttttcccctgaggaagtgacgcataatatttatacaatggtggatgttctgcttcat
cacattcagttggaacttcagcacggccattctttgcaggacctcttactgaaagcttgc
gcaaacctagcattttatatttggacccacgagttgctccctttggatattttgcttctg
gcacttattgatcgtgatgatgacccccatgctttgcgtattgtgatgagtctacttgat
aggcaagaacttcaacaaagagtgaaactatattgtatgaatcgaggtccccctgaacac
tggatttactctggagtcttcaagcgagttgaattgcaaaaggcccttgggaatcatctc
tcttggaaggacaggtatcccacattctttgatgatattgcagcacgtttgcttccagtc
attccattgatagtttatagactaattgaaaatgatgccaaggattcggctgaaagagtt
ctggccatgtattcccaatttcttgcttaccaccctttaagatttacatttgttcgtgat
atacttgcatatttctatggtcatcttcctgtaaagcttattgttcgaatattgaatgga
ctcgatatcaacaagatcccattttctgagtcattcccatcgcacgttaattcatcaaat
tctgccatgtgcccacctccggattactttgcaacgctcttactgggattagtgaataat
gtcatacctccattgcataacaactcaaaatctggttcagtgagtgatgctctaaataat
tcaatgcgtgccccacctaacaagactccagcaacgtctcagtctgggcaaacaaatgtt
tctgatggccaaaaagcattttatcaaattcaggatccaggcacatatactcaactggtt
cttgaaacagcagtaattgaattactctctcttcccgtatccgcatcccagattgtatca
tcattggttcaaatcgtcgtcaatatacagccaacattaattcaatccagcaatggcttg
catggagctccaaatggtgttggccaaagctcagttttaccaacatccccttcgggtgga
agcacagattccttaggtacaagcagatcaacagcttcagtatcaggaataaatgcatct
aactttgtttctcgaagtggttacacatgccagcaattgtcttgcttattgatccaagcc
tgtggtcttctactggctcagctgccttctgattttcatgtacaactctatatagaggcg
tcacgtataataaaagaaacatggtggctcactgacggcaaaaggtcactgggggaacta
gactctgctgttggttatgctttgttggatccgacatgggccgctcaagacaatacctca
acagccattggtaatattgttgccctgcttcattcttttttcagtaacctcccacaggaa
tggctagaagggacccatcttatcatcaaacatctcaggccagtgacatccgttgcaatg
ttgagaatagcattccgtataatgagtccattgcttcctagacttgccaatgcgcacacc
ctcttcagtaagaccctctcattgattttaagtatgatggtggatgtcttcgggaagaat
acgcagccaccgactcctgttgaaccattagaaatagcagatcttattgacttcttccat
cacataatccattacgaagggcagggaggccctgtgcaggcaaacagcaagccacgacca
gaggttttatccctctgtggaagagctgcagaaagcctccgtccagacatacagcacctc
cttttccacttaaaacctgacacgaattcttccatttatgctgccactcatcccaagttg
gtccagaatgcatcataa
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integrated database retrieval system
