Prunus avium (sweet cherry): 110762945
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Entry
110762945 CDS
T05161
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110762945
Spliceosome [BR:
pavi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110762945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
PPR_3
PPR_1
ARM_TT21_N
WRNPLPNID
Motif
Other DBs
NCBI-GeneID:
110762945
NCBI-ProteinID:
XP_021821361
UniProt:
A0A6P5T3C0
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MLPSRPPKLSLSTLSLTHSSFTFFSSLCSSNPKRKPLPMRSSLSLLRSLTLSLSHHHHPT
HRFPRPISGFPLAVAAKSRRVLALPSSSTFVEHLSGEASQPGENWDLSNVAQGEAFDLEK
CFSSTDLKHLAVPELEVPELEDLPEQWRRSKLAWLCKELPAHKAGTLSRILNAQKKWMRQ
EDATYVAVHCMRIRENDVGFRVYKWMMQQHWYRFDFALATKLADYMGKERKFSKCRDIFD
DIINQGRVPSESTFHILVVAYLSASVQGCLEEACGIYNRMIQLGGYQPRLSLHNSLFKAL
VSKPGTSSKHYLKQAEFIFHNLVTTGLEIHKDIYSGLIWLHSCQDTIDKERMTSLRKEMQ
QAGIEVGRDVLVSILRACSKEGDVEEAESTWLKLLHLDIGLPSQAYVYKMEAYSKAGEPR
RSLEIFREMQEQLGSANAVAYHKVIQVLCKAQEVELAESLMTDFINTGLKTFMPSYIDLM
NMYFNLGSHDKLESAFFQCLERCRPSRTIYSIYLDSLVKVGNLDKAEEIFDQMQSNGAIG
INARSCNTILSGYLSSGDYVKAEKIFDLMCQKKYDVDSPLMEKIDYVLSLSRKVVKRPVS
LKLSKEQREVLVGMLLGGLQIESDEDRKNHMIRFEFSENSSTHSLLRRHMYDQYHEWLHP
SCKTSESTDDILYKFSTISHSYFGFYADQFWPKGRLVIPKLIHRWLSPCALAYWYMYGGH
RTSTGDILLKIKGNEEGVEKIVRALKAKSLDCKVKRKGRVFWIGFLGSNSTWFWKLVEPY
ILDDLKHLLKGGQISDNSAVETENVNFGSGSDTDEDASESDHNDNDNNV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgagtagacctccaaagctctcactctctactctctctctaacccactcctcc
ttcactttcttctcctccctgtgctcctccaaccctaaacgtaaacccctccctatgcgt
tcttctctctccctcctccgctccctcacactttctctctcacaccaccaccaccctacc
caccgattcccgagacccatctctggtttcccgctcgccgtcgccgccaaatcccgccga
gtactcgccctcccctcttccagtactttcgtcgaacacctttcgggcgaggcctcgcag
ccaggggagaattgggatttgagcaatgttgcgcagggcgaggctttcgatttagagaag
tgcttttcttcaaccgacttgaagcacctggcggttccggagcttgaggttccggagctc
gaggacctcccggagcagtggcgaaggtcgaagctggcgtggctttgtaaggaactgccg
gcgcataaggccggcacgttgagtcggatactcaatgcgcagaagaagtggatgaggcaa
gaagatgccacttatgttgcagtgcattgtatgcgaattcgggaaaatgatgtcgggttt
agggtgtacaaatggatgatgcaacaacattggtatcgttttgattttgctcttgctacc
aagttagcagattacatgggtaaagagcgaaaattctcaaagtgtagggatatatttgat
gatataattaatcaggggcgtgtgcctagtgaatctacatttcatatattggttgttgca
tatcttagtgcatcggttcaaggttgcttggaggaagcatgtggcatttacaatcgtatg
attcagttgggaggctaccagccccggcttagcttgcacaattctctcttcaaagccctt
gtcagcaaacctggaacctcttcgaaacattaccttaaacaggctgagtttatttttcat
aatttggtaacaactggactcgagattcacaaggatatttatagtggcttaatttggcta
catagctgtcaggatactatagataaagagaggatgacatcattaaggaaagaaatgcaa
caagctggaattgaggtgggcagagatgtgctcgtgtctatcttgagagcttgctcaaag
gagggggatgtggaggaagcagaaagtacttggctcaaacttctccaccttgacattggc
ctcccatctcaggcatatgtttataaaatggaagcctattcaaaggctggagaacctagg
agatccctggagatattcagggagatgcaagaacagttgggttcagccaatgctgtggca
tatcataaagtcatacaggtcttatgtaaagctcaagaagttgaacttgcagagtccctc
atgacagatttcatcaacactggtttgaagactttcatgccatcttatattgatctaatg
aacatgtacttcaacttaggctcacatgacaaattggaatcggctttcttccagtgcctt
gagagatgtcgacccagccgtacgatttattctatatacttggattctttggtgaaagtt
ggtaatcttgataaagctgaggagatctttgaccaaatgcagagtaatggggcaattggt
attaacgctcggtcctgcaacaccatattaagcggatacctatcatctggagattatgtc
aaggcagaaaaaatatttgatctgatgtgccagaagaaatatgatgttgactccccattg
atggaaaagattgactatgtcttgagcttgagcagaaaagtagttaagagacctgtaagc
ctgaagctgagcaaagaacaacgagaagttttagtaggtatgctgttgggtggtttgcag
attgagtcagatgaagacaggaagaatcacatgatccggtttgagttcagtgagaattct
agcacacattctctgttaaggagacatatgtatgatcaataccacgagtggctacatcct
tcttgtaaaaccagtgagagtactgatgacatactgtataaattttcaaccatctcacat
tcttatttcggtttctatgcggaccagttttggccaaaaggtagactggtgattccaaag
ctaatccatagatggttgtcaccctgtgctcttgcctactggtatatgtatgggggccac
aggacttcaacaggtgacatattgttgaagataaagggaaatgaagagggtgttgagaag
attgtcagagccttgaaggcaaagtccctggattgcaaggtgaagaggaaggggagagtt
ttttggattggttttctgggaagtaattctacctggttctggaaattagtagaaccttac
attctagatgacttgaagcatcttttaaagggtggccaaatctcagataacagcgcggtt
gaaactgaaaacgtcaactttggtagtgggtctgatactgatgaggatgcttctgaatct
gatcacaatgataatgataataatgtgtag
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