Prunus avium (sweet cherry): 110762981
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Entry
110762981 CDS
T05161
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110762981
03041 Spliceosome [BR:
pavi03041
]
110762981
03036 Chromosome and associated proteins [BR:
pavi03036
]
110762981
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110762981
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110762981
mRNA cycle factors
Common to processing body (P body) and stress granule
110762981
Spliceosome [BR:
pavi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110762981
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110762981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
110762981
NCBI-ProteinID:
XP_021821407
UniProt:
A0A6P5T2S5
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MRTSWADLAANSAAENVTSGSSASNAVAGTAAAPTRSTYVPPHLRNRPPSADPPAPAYTG
PPANDRGGFSGSRWGGPRNDNIRSGPGYGGNGGHGGGWGSRSGGWDGRVREVNPFGEEEE
TEQPFSEQENSGINFDAYEDIPVETSGDNVPTPVNTFADIDLGDALNKNIQRCKYVKPTP
VQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGAHTVYPLALIL
SPTRELSIQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE
RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKEIQRL
ASDFLAKYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGVQGKQALTLV
FVETKKGADSLEHWLCMNGFPATTIHGDRSQQEREQALRSFKSGNTPILVATDVAARGLD
IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSLARSLADLMQESNQE
VPAWLSRYAARSSFGGGRNRRSGGGRFGGRDFRRDTSFSRGGSDYYGGGSSGGYGGSSGG
YSGGGGYGGPGMTSAWD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggcagatttggctgcaaattctgcagctgagaatgtaacttctggc
tcttccgctagcaatgctgttgctggcacggctgctgctcctactcgatccacctatgtc
cccccacatctgcgtaaccgtcctccttcagccgacccacctgctccagcctatactggc
ccgcctgccaatgatcgaggtgggttcagcggatctcgctggggtggtcccagaaatgac
aatattcgatctggacctggctatggtggcaatggtggtcacggtggtggatggggcagc
agaagtggtggttgggatgggagggtgcgagaagtgaacccctttggagaagaggaagaa
acagagcagccatttagtgagcaagagaacagtggtattaacttcgatgcatatgaagat
attccggttgagacaagtggtgataatgttccgacccctgtgaatacatttgcagatatt
gacttgggtgatgcacttaataaaaatattcagaggtgcaaatatgtgaaaccaacacct
gtgcagcgtcatgctattcccatctcccttgcgggccgggacttgatggcatgtgcccaa
actggttctggaaagacggctgctttctgtttcccaatcatcagtggaattatgacggga
caacctgcacagagaccgccccgtggtgcacatacagtttatccacttgctctcatttta
tctcctactagggagctttctattcaaattcatgaggaagctaggaaattttcatatcaa
acaggtgttagggtggttgttgcctatggaggagcaccaattaaccaacagctgcgggaa
cttgaaagaggtgttgatattcttgtggcaactcctggaagattggtggatttgctggag
agagctagagtttcattgcaaatgattaggtatttagccctagatgaggctgatcgaatg
ctggatatgggttttgaaccacaaataaggaaaattgtggaacaaatggacatgcctcca
ccaggtgcacgacagactatgctgttcagtgccacttttccaaaggaaatacagagactg
gcctctgattttcttgcaaagtacatctttctggcagttggaagggtgggttctagtact
gatttgattgtccaaagagtggaatttgttcatgagtctgataaaagaagtcaccttatg
gaccttcttcatgcacagagggccaatggcgtacagggcaagcaagctctgacattagtt
tttgtggagacaaagaagggagccgattcactggaacactggttgtgtatgaatggtttt
cctgcaactactattcatggtgacagatcacagcaggaaagagaacaagcattgaggtca
tttaagagcggcaacactccaattttggtggctactgatgtggctgcacgtgggcttgac
attcctcatgttgcacatgttgtcaactttgatcttccaaatgacattgatgattatgtc
caccgcattggtcgtactggacgagctgggaaatctggtttagctactgccttctttaat
gagaacaattcatcccttgctaggtctttagcagatttgatgcaagaatcaaatcaagaa
gtacctgcttggctgtcccggtacgcagctcgatcttcttttggtggtgggaggaaccgt
cgttctgggggaggtcggtttggtggccgtgacttccgaagggatacctctttcagtagg
ggtggttctgattactatggcggaggcagcagtggtggatatgggggttcttctggtggt
tatagtggaggtggaggatatggtggtcctgggatgaccagtgcatgggactaa
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