Prunus avium (sweet cherry): 110763134
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Entry
110763134 CDS
T05161
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110763134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110763134
03036 Chromosome and associated proteins [BR:
pavi03036
]
110763134
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110763134
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110763134
PBAF complex
110763134
GBAF(ncBAF) complex
110763134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Pou
Motif
Other DBs
NCBI-GeneID:
110763134
NCBI-ProteinID:
XP_021821586
UniProt:
A0A6P5T3Q5
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MATSSDKPPPAPSPTSVKPETPGSATPRQTQPSPSADANVILVPSYSSWFSPDHIHHCEV
RFLPEFFDSRSPSKNPSLYKYYRNTIVKHSRAVNPSRKLTFTEARKALVGDVGSVRRVFD
FLEAWGLINYTPSALNKPLRWEDKDSKAAAESPSGGPKDSASAPNKESPKKRTCNGCKSL
CSIACFVSEKYDMTLCARCYVRGNYQIGVSSSDFRRVEINEEMGNGWADKDTLHLLEGLM
HYGDDWRKVAQHVGRSEKECVAHFLKINFGEELNGDLDSGNLDHKPSSALQDNAGDAEFG
MEGNGDGTTPSLGKRMRLTPLADASNPIMAQTAFLSALAGVKVAEAAACAAVTTLCEADY
ETSRMSAGFRASNARQHETDAALNGDTNTDTNLDALGANFVDANSQLEKEGLDVGRALSG
ITGVQMKEIQGKIDRFEALDLQMEKEWEQLEQMRNMLFVDQMTLLIHQSSAPKTAERMQE
KNVIID
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcctccgacaagcccccgccagctccttcaccgacctccgtcaagcccgag
acgccgggctccgccactccacgtcaaacccaaccgagcccgagcgccgatgctaacgtc
atcctcgtccccagctactccagctggttctcaccggaccatatccaccactgcgaggtc
cggttcctcccggagttcttcgactctcgctctccgtccaaaaaccctagcctttacaag
tactaccgcaacaccatcgtcaagcactccagagctgtcaacccttctcgaaagctcacc
ttcaccgaggcccgcaaggctctcgttggcgacgtcggctccgttcggagggtttttgat
ttccttgaggcctggggtttgatcaattacactccttccgcgctcaacaagcccctccgg
tgggaggacaaggacagcaaggccgccgctgaatccccctccggcggtcccaaggactct
gcttccgctcccaacaaggagagccccaagaagaggacttgcaatggctgcaagtctctt
tgtagtattgcctgctttgtttctgaaaagtatgatatgacgctgtgtgcaaggtgctat
gttcgtgggaactatcagattggtgtgagttcttcagatttcaggcgggttgagatcaat
gaagagatggggaatggctgggctgataaggatactctgcatctcttagaaggcctcatg
cattatggtgatgattggaggaaggttgcacaacatgttggtagaagtgagaaggaatgt
gttgctcattttctcaagattaatttcggtgaggaattgaatggagatttggattctggg
aatttggatcacaagcctagtagtgcattgcaggacaatgcaggtgatgccgaattcgga
atggagggtaatggtgatggtacaacaccgtctctaggtaaacgaatgcgtctcacgcct
cttgcagatgcgagcaacccaattatggctcagacagcctttctgtcagcgttggcgggc
gtaaaggttgcagaagctgctgcttgcgccgctgtaactacgctgtgtgaggcagattat
gagacaagtagaatgagtgctggatttcgggcttcgaatgcaagacagcatgaaactgat
gctgcattgaatggagataccaacacagacaccaatctagatgcactgggggcaaatttt
gtagatgcaaattcacagcttgagaaggaagggctggatgtggggagagcactttctggg
attacaggggtgcagatgaaagagatccaagggaagattgatcgttttgaggcgttggat
ttgcagatggagaaagaatgggaacaactggagcaaatgagaaacatgctctttgttgac
cagatgactcttttaattcatcaaagttctgcaccaaaaactgcagaacggatgcaggag
aagaatgtaataatagattga
DBGET
integrated database retrieval system
