Prunus avium (sweet cherry): 110763448
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Entry
110763448 CDS
T05161
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110763448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110763448
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110763448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_EIPR1
DUF7165
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
110763448
NCBI-ProteinID:
XP_021821928
UniProt:
A0A6P5T4E0
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSLISQNVPSAFKANKTKRDDVDEPSFLQGNDDNGNGKQSNLDIMKTKKRKKAHKEEDEK
VAIEQEKEMKKLENFLFGAIYSPLEFGKEDEKEVGDAVDKGSSLFFVDRSANSELSVHEE
DGELSEEETRQRKPVWVDEEEEKTNINIAKVNRLRKLRKEEDESLISGSDYVSRLRAQHA
KLNPGTEWAQLDPQLRNSRYSDDESSDDENGVAVARGYKGVDAVDDLLRTNEDLVLKSSA
KLLPGLLEYSVLVHANAEEPSKGPINSVQFHRNGQLLLTAGLDRRLRFFQIDGKRNAKIE
SIFLDDCPVRKASFLPDGSQVIIAGRRNFFYSFDLVKAKVDKIGPLVGREEKSLEVFEVS
PDSSTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWD
LRTGACLHKAVDEGCINGTSLCTSPNGALFAAGSDSGIVNIYNSEEFLGGKRKPIKTIEN
LTTKVDFLKFNSDAQILAICSSMKKNSLKLIHVPSFTVFSNWPPQKKALHYPRCLDFSPG
GGFMAVGNAAGKVLLYKLHHYHHA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaatatcacagaatgttccttcggcttttaaagccaacaagactaaaagggat
gatgttgatgagccttcatttctgcaagggaatgatgacaatggaaatggaaaacaatct
aacttagatattatgaaaacgaagaagcgaaagaaagcacacaaggaagaggatgagaaa
gtggctattgagcaagagaaggaaatgaagaagctggaaaactttttgtttggagccatt
tattccccacttgagtttggaaaggaggatgagaaagaagttggagatgcagtggataaa
ggttcttctttattctttgtggaccgttcagccaatagcgagctctcggtgcatgaagag
gatggagagttatcggaagaggaaactaggcaaaggaaacctgtctgggtggatgaggaa
gaggaaaagaccaatataaatattgctaaagttaacagattaaggaagctaaggaaggag
gaggatgagagtttgatttctggttcagattatgtctcaagattgagggctcaacatgct
aagctgaaccctgggacagaatgggctcagcttgatccacagttgaggaacagtagatat
tctgatgatgaatcatcagatgatgaaaatggggtagcagtggcccgtggctacaagggt
gtagacgctgttgatgatctccttcgaacaaatgaggatcttgttttgaagagcagtgca
aaattgttgcctggacttcttgaatattcagtacttgtacatgcaaatgcagaggaacct
tctaaaggaccaataaattcagtgcagtttcatagaaatgggcagttgcttcttactgct
ggattggatcgaaggcttaggttttttcagattgatggcaagcgcaatgctaaaatagaa
agcatctttcttgatgactgtcccgttcggaaggcgtcctttttgcctgatggctctcag
gttattatagctggaaggaggaacttcttttacagctttgacttggtgaaggcaaaagtt
gataaaataggtcccttggttggtcgagaggagaaaagcttggaagtttttgaggtttcg
cctgattctagtacaattgcctttgtgggaaatgaaggttatatcttgttggtttcgtct
aaaacaaaagaattgattgggacattaaagatgaatggaaccgttcgttctttagctttt
gccgatgatgggaagcaattgttgagctctggtggagatggacaggtttatcactgggat
ctcagaacaggggcttgcctccataaggctgttgatgaaggttgtataaatggtacatct
ctttgtacatctccaaatggagcattgtttgctgctggttcagacagtgggattgtcaat
atttacaacagtgaggagtttttgggtggcaagagaaaacccatcaagaccatcgagaat
cttacaacgaaagtagattttctgaagttcaacagcgatgctcaaatattggctatttgt
tcgagtatgaagaagaacagcttaaagttgatacatgttccatcatttactgttttctcg
aactggcctccgcagaagaaggcccttcactatccccgctgcttggattttagccctggc
ggaggtttcatggctgtaggaaatgctgctggaaaagtgttattgtacaagttgcaccat
taccatcatgcatag
DBGET
integrated database retrieval system
