Prunus avium (sweet cherry): 110763514
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Entry
110763514 CDS
T05161
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110763514
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110763514
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PITH
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110763514
NCBI-ProteinID:
XP_021822001
UniProt:
A0A6P5T475
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MKVPLTATVLVLIIWLIASPNRSCSARIVLPDDFDLFDYGAVHHNTQTDDEGLSQEAFSK
GWETGATTRDSFNRANAQTEKYDPQAFLEAWEAKTNTFNVVDYGAVGNGLVDDTKAFLKA
WGAMCASSTQGTLTLVVPQGKRFLLNAVAFEGPCRASKVNFQIQGSIVAPNNIGAWTNKE
MWIQFSNVQGLSVNGGGRIDGNGAVWWKACGSKGCQRPTSLHFNKCHGFQLSRLAFFNSP
KNHISICSCNGPRVFGLFIWAPKDSPNTDGIDISESTRVTIQSSHIATGDDCIAINSGSS
YIKIRDIKCGPGHGISIGSLGQHGEYSQVEEVQVSNCTFKGTTNGVRIKTWEGGSGYARK
ITFEGITFEDTKNPIIIDQHYFAKPTSAMDISKSVQVSDVTYRNINGTCADEKAITLACA
GGGCTNIVMDNVTIKSDLPNKRSYAYCDNAHGTSSFSVPSVPCLSH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcccgcttaccgccaccgtcttggtcctaattatttggctaattgcttcacct
aatcgttcatgtagtgctagaatagtcctgccagatgatttcgatttgtttgattatggt
gctgttcatcacaacacccaaactgatgatgagggtctttctcaagaggccttctcaaaa
ggatgggagactggagcaacaacaagagattcattcaatcgtgcgaatgcccaaactgaa
aaatatgatccacaagccttcttggaagcatgggaagcaaaaacaaatactttcaatgtg
gtagattatggtgctgttgggaatggcctagtagatgatacaaaggccttcctcaaggca
tggggagctatgtgtgcatcatcaactcaaggcacccttaccctggtggtaccacagggc
aaaagattcttgttaaatgctgtggcgtttgaagggccttgcagggctagtaaagtaaat
ttccagatacaagggagtattgttgcaccgaataacattggtgcatggacaaacaaggag
atgtggattcagttttcgaatgtacaaggtctatcggtcaatggaggaggtcgaattgat
ggaaacggcgctgtttggtggaaagcttgcggtagcaagggctgccagagaccaacttct
cttcatttcaacaaatgtcatggcttccaattgagtcgtctggcatttttcaatagccct
aaaaatcatataagcatttgtagctgcaatggcccccgagttttcggtctcttcatttgg
gctcctaaagacagtccaaacacagatggaattgatatttccgaatcaacccgagtcaca
attcaatcttctcatatagcaactggtgatgattgtattgccatcaatagcggttcatct
tatatcaagattagggacattaaatgcggaccaggccatggtattagtattggcagtcta
ggtcaacatggagaatacagtcaagtggaagaggtgcaagtgagcaattgcaccttcaag
gggacaacaaatggagtgagaatcaagacatgggaaggcggttcgggatatgctaggaag
atcactttcgaggggatcacatttgaagacaccaaaaatcctatcataatagaccagcac
tatttcgctaaacctacttcagcaatggacataagcaagtcagtacaagttagcgacgtg
acgtaccgaaacataaacggaacttgcgctgatgagaaagccataactttggcctgcgca
gggggcggatgcacaaacattgtgatggacaacgtgaccataaaatcggatcttccaaac
aagaggtcttatgcttactgcgacaatgcccatggcacctcatccttctctgtgccttct
gtcccatgcctttcgcattga
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