Prunus avium (sweet cherry): 110763900
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Entry
110763900 CDS
T05161
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110763900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110763900
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110763900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_15
TPR_19
TPR_2
TPR_16
TPR_9
TPR_8
ANAPC16
Motif
Other DBs
NCBI-GeneID:
110763900
NCBI-ProteinID:
XP_021822480
UniProt:
A0A6P5T5U0
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MEAELRRVGDQDRKLVDDKYNVEATESLANEALHLPISEAAPIYEQLLTVFPTAAKYWKQ
YVEAQMVVNNDEATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKGVEGQEETRKAFDFM
LSYVGADIASGPVWMEYITFLKSLPALSTQEESQRMIAVRKVYQKAIVTPTHHIEQLWKE
YENFENSVSRQLAKGLLSEYQPKFNSARAVYRERKKYVDGIDWNMLAVPPTGSYKSWTFT
DLPSYMATSRTYFSWSLPLFAEELQWMAWKKLLAFEKGNPQRIDNGSSNKRIIFTYEQCL
MYLYHYPDLWYDYAMWHAKSGSIDAAIKVFQRSLKARPDSEMLRYAYGELEESRGAIQPT
KKIYESLLGDGVNTTALAHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMA
FCLDKDPKMAHNVFEAGLKRFMHEPVYILEYADFLTRLNDDRNIRALFERALSSLPSEES
VEVWKRFTSFEQTYGDLASMLKVERRKKEALSGTGEEGPSSLESSLQDVASRYSFMDLWP
CSSKELDHLARQEWLAKNINKKVEKSTMLNGLGFVDEGSTGLTSNLAVSSKVVYPDTNQM
VIYDPRQKPGAGNFQTTTAAGVPTASKALSNPMIAAVGGQTMSAFDEILEATPPALVAFL
SNLPVVEGPTPDVDVVLSICLQSDVPAPQPGKSGAAPMPLPSIPAPSTSDLSVSSKSHPI
PSASSFKPARGKRKHFDRQEEEEASVQSHPLPRDAFRIRQIQKARGTASQTGSASYGSAI
SGDLSGSTG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgagctcagacgagttggagatcaagatcgcaaactcgtggatgataaatac
aatgttgaagccaccgaaagtctagccaatgaggcactacatttgcctatttcagaggca
gcaccaatatatgagcaacttttgacggtgtttcccactgcagcaaaatattggaagcaa
tatgtggaggcgcagatggttgtaaataatgatgaggccacaaaacagatatttagccgg
tgtttgttgaattgtttgcaaattcctctttggcgatgctacattcgtttcatcagaaag
gtgaatgacaagaagggggtagagggtcaggaagagactagaaaagcttttgattttatg
cttagttatgttggagcagatatagcatctgggcctgtgtggatggagtacatcaccttt
ttaaagtctttgccggctttaagcacacaggaagagtcacaacgcatgattgctgtgcgg
aaagtataccagaaagccattgttactcctacccatcacattgaacaactttggaaggaa
tatgaaaattttgaaaattctgtcagccgtcaactggcaaaaggactgttatctgaatat
caacccaaatttaacagtgccagggccgtctacagggagcggaagaagtacgttgatgga
attgactggaatatgcttgctgtaccaccaactggctcttacaagtcttggacatttact
gacttgccttcgtacatggcaacaagcaggacgtatttttcttggtctttgccattgttt
gctgaagaattgcagtggatggcatggaagaagttgttagcttttgaaaaaggaaatcca
caaaggatagacaatggatcatccaacaagcgaattattttcacttatgagcagtgtcta
atgtatctataccattatcctgatttgtggtatgactatgccatgtggcatgcaaaaagt
ggttcaatagatgctgcaattaaagttttccagagatctttgaaggcaagacctgactcg
gagatgcttcggtatgcttatggagagctggaagaatcccgtggagcaattcagcctaca
aagaaaatatatgaaagccttttgggagatggtgttaacacaacagcacttgctcatata
cagttcattcgtttcttaaggagaactgaaggagttgaagcagctcgcaagtacttttta
gatgctcgcaaatctccaaattgcacgtaccatgtttatgttgcttatgcaatgatggct
ttctgtcttgacaaggatccaaagatggcacacaatgtttttgaagctgggttgaaacgg
tttatgcatgagcctgtgtacattcttgagtatgcagattttttaactcgtttaaatgat
gatagaaatattcgagcgttatttgagagggcattaagctcactaccatcagaggaatct
gttgaggtatggaagcgattcaccagttttgagcaaacttatggagatttagctagcatg
ttgaaggttgagcgaagaaaaaaagaagcactttctggaacaggtgaagagggaccttca
tcattggaaagttcattgcaagatgttgcatcacgatacagtttcatggatctttggccc
tgctcttcaaaggaattggatcatttagcccgacaagagtggcttgctaaaaatatcaat
aagaaagtggagaagtcaactatgctgaatggacttgggtttgtagatgagggttctacg
ggcctgacaagcaatttagcagtgtcttcaaaagtagtttatccagatactaaccaaatg
gttatctatgatccacggcaaaaacctggtgctgggaattttcagaccacaacagcagct
ggagttcccactgcttctaaagccttgtcaaatcccatgattgcagcagtaggtggtcaa
acaatgagtgcgtttgatgaaatattagaagcaacaccacctgctttggtagccttctta
tcaaatttgccagttgttgagggtccaacaccagatgttgatgttgtgttgtcaatttgt
ttgcaaagtgacgtaccagcaccacagcctgggaagtcaggggctgccccaatgccattg
ccatctatacctgctccttccaccagtgacctttctgtttcaagcaagtctcatcccatc
ccaagtgcgtcatctttcaagccagccagggggaaaaggaaacattttgataggcaagag
gaggaagaagcttcggtccagagccacccactcccaagagatgccttcaggatacggcag
atccagaaggctcgcggtactgcatctcaaactggatcagcttcatatggaagtgcaatt
tctggagatctatctggcagcactggctaa
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