KEGG   Prunus avium (sweet cherry): 110763901
Entry
110763901         CDS       T05161                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pavi  Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pavi04812]
    110763901
Cytoskeleton proteins [BR:pavi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     110763901
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st eIF2A WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_VPS8 PAN2_N
Other DBs
NCBI-GeneID: 110763901
NCBI-ProteinID: XP_021822486
UniProt: A0A6P5T5Q4
LinkDB
Position
Unknown
AA seq 803 aa
MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVGFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSSGPETTGVRSLTFSPDGR
ALLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYAIGNASRLNGHTESKPLSGGNLSLLNENAAKSLGRLSVSQCSDSLVKETKSLGRLS
VSQNSDPTKEPKVIASAGNVPGTPQRINLNSSPKTIAATSAAVPSATTLKRSSTKINSTA
NLPSFNKSDVIPVIVPRTSIRSELPAESRKEAGVSGRTLAFSLQSKATDFRKLSNSREEV
DKPTVSSVSDSAASKATELSSAADKNGFSTVISSTQGIHTAERNTKDDRYFGPGKHETSS
MMEATASYQHESYETRGHKVSRDAYSAEGQRGGRMRSLAVNWEKRDRYSNYEGPTPNSTL
GTASAVNIPPLNAFKQRGYPTSTEKELGSASDEDAIADLMEKHDQFVGSMQSRSTKLQVV
YRYWERNDVKGVIGAMEKMADHAVIADVVSIMTEKIDIVTLDICTCLLPLLNGLLESNMD
RHLGISLEMLLKLVRVFGSVIYSTLSASSSVGVDIEAEQRLERCNNCFMELEKVKTCLSA
LTRRGGSIAKSAQELNLALQEVS
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgactactaaacgcgcttacaagctacaggaattcgtagcacattcttcaactgtgaat
tgccttaagattggcagaaaatcatccagagttcttgtcactggcggagaagatcacaag
gtcaatctctgggccattgggaaacccaatgccatactgagtttatctggacacaccagt
ggaattgattcggtaggctttgattcttcagaggtcttagtagctgcaggagctgcaagt
ggcacaattaagctttgggatttagaggaggcaaagattgttcgcacacttactggtcac
agatccaattgtatatctgtggacttccatcctttcggggagttctttgcatctggctcg
ctggacacaaatctcaaaatatgggatatcaggaagaaggggtgtattcacacatacaaa
ggccatactcgaggagtcaatgctatcagatttacaccggatggccgttgggttgtttct
ggtggagaggacaacactgtgaagttgtgggatctgactgctggtaagctgctgcatgat
ttcaagtgtcatgagggccagattcagtgcatagattttcatccccacgagtttctgcta
gctacaggttcagctgataggacagtcaaattttgggaccttgaaacctttgagttaatt
ggctcatctggacctgagacaactggagtgcgttctttgacttttagtcctgacgggaga
gccctactctgtggattgcatgaaagtttgaaggttttctcgtgggagccaataagatgc
catgatgctgtggatgttggatggtctcgattgtcagatcttaatgttcatgagggaaag
cttcttggatgctcatacaatcagagttgtgttggagtgtgggttgtagacatctcgcgc
atagaaccgtatgcaattggtaatgctagcagactgaatgggcacacagaatctaaacca
ttgtctggcgggaatctgtcactactcaatgagaatgctgctaaaagtttgggtcggcta
tctgtttcccaatgttcagattctttagtgaaggaaacaaaatctcttggaaggttatca
gtttctcaaaattcagatcccactaaggagccaaaagttattgcatccgcaggaaatgtt
cctggtactcctcaaaggatcaatttgaactccagtccaaaaactattgcggctacttca
gcagcagttcctagtgcaacaaccctgaagaggagttctactaagatcaattcaacagcc
aatcttccaagttttaacaagtctgatgtcatacctgtaattgtaccaagaactagtata
agatcagagttgccagctgagtccagaaaagaggccggtgtttctgggagaacactggca
ttttctttgcagtcaaaggcaactgatttccggaagttgtccaatagcagagaagaagtg
gataagccaactgtctcttcagtgtctgattccgctgcttctaaggctactgaattaagc
agtgctgcagataagaatggtttctcaacagttataagttcaacccagggaatacatact
gctgaaaggaacacaaaggatgacagatattttggacctgggaagcatgagacaagttca
atgatggaggcaactgcgagctaccagcatgaaagttatgaaactcgagggcacaaggtg
agcagagatgcatactctgctgaaggtcaaagaggaggaagaatgcgctcacttgctgtg
aattgggagaaaagagatagatattctaactacgagggacctacgcccaatagtaccctg
ggaacagcatctgcggtgaacattccccctttgaatgcgtttaagcagcgaggctatcct
acatctactgaaaaagaattggggtctgctagtgatgaggatgctattgcagatctcatg
gaaaaacatgaccaatttgttggctccatgcaatctcgttcaaccaaattacaggtagtc
tatagatattgggaaaggaatgatgttaagggggtcattggtgcaatggagaagatggct
gatcatgctgtcattgcggatgtagttagcattatgacagaaaaaattgacattgtcaca
ctggatatatgcacttgtcttctgccactcctcaatggccttctagaaagtaacatggat
aggcatttaggcatttctttggaaatgctgctcaagctggttagagtatttggttctgtg
atctattcaacattatccgcatcatcatctgttggtgttgatattgaagccgagcaaagg
ctggagcgttgcaacaactgttttatggagcttgaaaaagtcaaaacctgtttgtctgct
cttaccagaagaggaggatcaattgcaaagtctgcacaagagttgaatctagctcttcag
gaagtttcatga

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