Prunus avium (sweet cherry): 110764048
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Entry
110764048 CDS
T05161
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110764048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110764048
Membrane trafficking [BR:
pavi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110764048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
TPR_VPS8_2
Beta-prop_EML
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
zf-RING_2
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
110764048
NCBI-ProteinID:
XP_021822646
UniProt:
A0A6P5T649
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MTKKLTQFEPQLAMELDLDSFLNSHLSLSDEDDDDNLNSVPHRTIEEILNDSDSSASSSP
PSTIHRLASDPKPPHPPTDAVSVSSAKSDESSQVRPRPNLYTRVKSGELSDDPVGKVSKP
SPWLLGGMRTNAKPGAALAAAAAASRSMPTPHAAAIKSKRSAGSGVFQKVLESTELDDKS
EVGSNSNNDTNVGSSEVTESNSNEGEVDFGDELLRKDRVWERERERELEETSQGIEVSAG
NAPEEVKNVSFDENLTNLDANDVKDNEFNNNVEVVEECQPEIQDIDENSSGSKHSDSEEE
RLGDGGGGGNDNDGEGGGGGDDDDNNDRDSDDDGELGSSITQLVEERIGQLESRRISKKA
EKKLQKPLEIAEELEKKQASTALHWEEGAAAQPMRLEGVRRGSTTLGYFNVDANNPITRT
LSAPALRRDHGSPQVLAVHSNYIAIGMARGAILVIPSKYSAHNADIMDAKMLILGLQGER
SYAAVTSICFNQQGDLLLAGYADGHITVWDVQRASVAKVITGEHTAPVVHTLFLGQDSQV
TRQLKAVTGDSKGLVLLHSFSVVPLLNRFSIKTQCLLDGQRTGTVLSASPLLFDEFSGGA
SQSAQGNGTVTGSSIGGMMGGDASWKLFNEGSSLVEEGVVVFVTHQTALVVRLTPNLEVY
AQLSKPDGVREGAMPCTAWKCTTQSRRLPANTENMPAEVVERVSLLAIAWDRKVQVAKLV
KSELKVYGKWSLESAAIGVAWLDDQMLVVLTMTGQLCLFAKDGTVIHQTSFSVDGFGGDD
LIAYHTHFVNIFGNPEKAYHNCVAVRGASVYVLGPMHLIVSRLLPWKERIQVLRRAGDWM
GALNMAMTIYDGQAHGVVDLPRTLVAVQEAIMSYLVELLLSYVEEVFSYISVALGNQIGI
MDQVDDLNSKSSSVHSEIKEQYTRVGGVAVEFCVHIKRTDILFDEIFSKFVAVQQRDTFL
ELLEPYILKDMLGSLPPEIMQALVEHYSRKGWLQRVEQCVLHMDISSLDFNQVVRLCREH
GLYSALVYLFNKGLDDFRSPLEELLVVLQNSKKEGATALGYRMLVYLKYCFSGLAFPPGQ
GTIPPPRLPSLRTELLQFLLEGSDAPNSRAAGGEYLNLYFLLELDTEATLDVLRCAFIED
EISKPDVSSHDSADANMELPDGNNSMAQSQNSMVQSTVDTLIHIVSKGISQTDGSPSNDE
TASTVEWPSKKDIGHLFEFIAYYVACGRANVSRHVLSQILEYLTSQNNFPSWVPGDTITS
KKREKQVLGLLEVVPETDWDSSYVLQLCEKARFYQVCGLIHNSRHQYLAALDCYMKDVDE
PIHAFSFINKTLLQLTDNESAAFRSEVISRIPELFDLNREGTFVLVIDHFTSEEGSHILS
ELRSHPKGLFLYLKTVIEVHLSGTLDFSSLRKDDLVRVKDQSKAVEAYLERICDIPKLLR
NNPVNVTDDMIELYLELLCQYERNSVLKFLETFDSYRVEHCLRLCQKYGITDAASFLLER
VGDVGSALLLTLSTLNEKFIKLDTAVGSLVSSGSARTEHFSNALKLEEVSDINSILHACI
GLCQRNTHRLNPDESEALWFRLLDSFCVPLTDSLNAGRVSKGDDHKTVVAESLESEEDEV
AFIIEWRISKLHKGAHILRKVFSRFIKEIVEGMIGYVRLPTIMSKLLSDNGSQEFGDFKF
TILGMLSTYGFERRILDTAKSLIEDDTFYTMSILKKGASHGYAPRSQICCICDCLLDKNS
SSYIRIFNCGHATHLQCEVLENGTSSSSSSSGCPVCMPKKKSQRSRNKSVLPEKSLVKGF
SSRTQQIHGTTVHPHESNASENTYGLHQISRFEMLTNLQRDRGLVEIENMPQLRLAPPAV
YHEKVQKGTVLSPAESSSDLARIGKQSKTKQLRELKVKGSSLRFPLKSNIFGNGKEKTSK
R
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaagctgactcaattcgaaccacaacttgccatggaactcgacctcgactcc
ttccttaactcacacctttccctctccgacgaagacgacgacgacaaccttaattccgtc
cctcaccgtacgatcgaagaaatcctcaatgactccgattcgtccgcgtcatcgtccccg
ccctccactatccaccgcctcgcatctgatcccaaaccaccacatccgcccaccgacgct
gtatcagtctccagcgctaaatccgacgagtccagtcaagtccggccgaggcccaatttg
tacactcgggtcaagtccggcgagttatcggacgatccggtcggaaaggtttcgaagccg
tcgccatggttgcttggaggcatgagaacgaatgcgaagccaggggcggcgctcgcggct
gctgcggcggcctcgaggtcgatgcctacaccgcacgcggccgcgatcaaatcgaagagg
agcgccgggagtggagttttccagaaggttctggagagtacggaattggatgataaatcc
gaggtagggtccaattctaataatgatacgaatgtaggtagttctgaagtgactgagtca
aattcgaatgaaggagaagtggattttggtgacgaattgttgagaaaagatagggtttgg
gagagggagagggagagggagttagaggaaacgtctcaaggtattgaagtaagtgctggg
aatgctccggaagaagtgaaaaatgttagttttgatgagaatttgacaaatttagatgca
aatgatgttaaagataatgaatttaacaataatgttgaggttgtggaggaatgtcaacca
gaaatacaagatatagatgaaaacagttctggttccaaacatagtgatagtgaggaggag
cgtcttggtgatggtggtggtggcggtaatgataatgacggtgagggtggtggtggtggt
gatgatgacgataataatgatcgtgatagtgatgatgatggtgaattgggaagttcaatc
actcaacttgtggaggagagaattgggcaattggagagcaggaggattagtaaaaaagct
gaaaagaaattgcagaagccactcgaaatcgctgaagagctagagaagaagcaagcttct
actgctttgcattgggaagagggtgctgctgctcaacccatgaggcttgagggtgttcgg
agaggctccaccacattgggatacttcaatgtcgatgctaacaatcccattaccaggacc
ctttcagctccagcgttacggcgtgatcatggttcaccacaagtcttggcggttcacagt
aattacattgcaataggaatggcaagaggtgctattcttgttatccctagtaaatactct
gctcataatgctgatatcatggatgcaaagatgctaattcttggattgcaaggtgaacga
tcttatgctgcagtgacttctatatgcttcaatcagcaaggggacctgctcttagcaggt
tatgctgatggtcacattacagtttgggacgtacagagggcatcggttgctaaagtaatt
actggagaacatacagctccagttgtacatacattgtttttagggcaggattctcaagtt
acacgtcaattgaaggcagttaccggtgatagtaagggcctggtactgttacattctttc
tctgtggttcccctgcttaataggttctccattaaaacacagtgccttcttgatggacaa
agaacgggcacagtgctgtcagcttcacccctcctctttgatgaattctctggaggggct
tcacaatctgctcagggaaatgggacggttacaggtagcagtattggtggtatgatgggg
ggagatgcaagttggaaactcttcaatgagggatcttctttggttgaagaaggtgtggtc
gtatttgtcacccatcaaactgctctggtggtaagactaactcccaatttggaagtctat
gcacaactttcaaaaccagatggggttcgggagggtgccatgccttgtactgcttggaaa
tgtacaacacaatcacgccgtttacctgctaatactgaaaatatgcccgctgaagtagtt
gaaagagtttcgctacttgcaattgcttgggatagaaaagttcaggtggcaaagttggtc
aaatcggagctgaaagtatatggtaaatggtctcttgaaagtgcagccataggtgtggct
tggctggatgatcagatgctggtggttcttacgatgactggacaactttgtttgtttgca
aaggatggaactgtaattcaccaaacaagtttttctgtagacggttttggaggggacgat
cttattgcttatcatactcacttcgttaatatatttgggaatcctgaaaaagcttatcac
aattgtgtagctgtaagaggagcttctgtatatgtacttggacctatgcatcttattgtt
tcccggcttctcccatggaaggaacgaattcaagttttaaggagagcaggtgattggatg
ggtgccttgaacatggcaatgacaatttatgatggccaagctcatggtgtcgttgacctt
cctagaactctggttgctgtacaggaggccataatgtcctacctggttgagttacttttg
tcatatgtagaggaagtattttcatatatatcagtagcattaggcaaccaaattggaatt
atggatcaagttgacgacttaaacagcaaaagcagttctgtgcactctgaaataaaagag
caatacacccgtgtcggtggagttgcagtggaattctgtgtccatatcaagaggactgac
atactttttgatgaaatcttttccaagtttgtagctgttcaacagagagacacatttttg
gagctgttggagccgtatatattgaaggacatgcttggttctcttccacctgagattatg
caagcactggtagagcattatagccgcaaaggatggttacagcgtgttgaacaatgtgtt
ctccacatggatatttcatccttggatttcaatcaggttgttaggttatgccgggagcat
ggattgtatagtgctctggtgtatctcttcaataaaggtttggatgatttcaggtcacct
ttagaggaactgttggtggtcttgcaaaatagtaaaaaagaaggtgctactgcccttggt
taccggatgctagtttatttgaagtactgtttttcaggccttgcttttccaccaggacag
ggaacaattcctcctccacgcttgccatctctcagaacagaacttctgcaatttttatta
gagggttctgatgctcctaattcaagggcagcaggaggagaatatcttaacctgtatttt
ctcttggagctagatactgaagctactttagacgttctgagatgtgcgttcattgaagat
gaaatctcgaaacccgacgtttcttctcatgattcagctgatgcaaatatggagctgcca
gatgggaataattcgatggctcaaagtcagaattcaatggttcaaagtacagtagatact
ctcattcatattgttagtaagggcatctcccaaacagatggatctcctagcaatgatgag
actgcatcaacagtagagtggccttcaaagaaagacattggtcatctgtttgagtttatt
gcgtactatgttgcatgtggaagagctaatgtctcgagacatgtactgtctcaaattttg
gagtacttgacgtcacagaataactttccatcatgggttcctggagataccataacttca
aaaaaaagagagaagcaggttcttggccttcttgaggtagtgcctgagactgattgggat
tcatcttatgtgttacagctatgtgagaaagcacgattttaccaggtttgtggcctaatt
cataacagcaggcatcagtatcttgctgctctggattgctacatgaaagatgtagatgaa
cccattcatgccttctcctttatcaacaaaacattattacagttgactgacaatgaatcc
gccgcttttcgatcagaagtaatttctcgaattccagagctttttgacttaaacagagaa
ggcacattcgtcttggttatcgaccattttactagtgaagaaggttcacatatcctctct
gaacttcgttcccatccaaaaggcctattcctttacttaaaaacggtgattgaggttcac
ttatctggcaccctcgacttttcaagtttaagaaaagatgatcttgtgagggtgaaggat
caatcaaaagcagtggaggcttacttggaaaggatctgtgatatcccaaagcttttgcgt
aacaatcctgttaatgtgactgatgatatgattgaactttatctggagctgttatgtcag
tatgagcgcaattcagttctcaaattcctagagacttttgatagctatcgcgtggaacac
tgtttacgcctgtgccagaaatatgggataacagatgctgcatcattcttgttggaaagg
gttggtgatgttggcagtgctcttttacttacactttccaccctcaatgaaaaatttatc
aagcttgatactgctgtgggaagtctggtatcaagtggttctgcacgtactgagcatttc
agcaatgctttaaaattggaggaggtgagcgacattaacagtatattgcatgcctgtatt
ggattgtgccaacggaacacccatcgtttaaatcctgatgaatcagaggcactctggttt
agattactggactcgttttgtgtgcctttaacggattcccttaatgctggaagagtatct
aaaggagacgatcataaaacagtggtagctgagtcattggaatcagaagaggatgaggtg
gcttttattatagagtggagaatctcaaagctccataaaggcgctcatatcttaagaaaa
gtgttctctcggttcatcaaggagattgttgagggcatgataggttatgttcgccttcca
accatcatgtccaaactcctttctgataatggtagccaggaatttggtgattttaaattc
acaatattggggatgcttagcacatatggctttgaaagaagaattctggatactgccaag
tccctgatagaagatgatacattctacactatgagcatactcaagaaaggggcctctcat
gggtatgcccctcggagtcaaatatgttgtatatgtgattgtcttcttgacaagaactct
tctagctacattcgcattttcaattgcggtcatgcaacacatcttcaatgcgaagttttg
gagaatggcacatcaagtagtagctcgtcctccggatgccctgtttgtatgcctaagaag
aaatctcagaggtccagaaacaaatcggtccttccagagaagagtttagtgaaggggttt
tcttcaagaacccaacaaatacacggaacaactgtccacccacatgaaagcaatgcatca
gagaatacctatgggcttcaccaaatatcgcgatttgagatgttgaccaatttgcagaga
gaccgaggattggtcgagattgaaaacatgcctcaactgaggcttgcacctccagctgtg
tatcatgaaaaggttcagaaaggaactgttctttcaccagcagaaagtagcagtgatctt
gcgagaatagggaaacaaagtaaaaccaagcaactcagggagctaaaagtaaaggggtca
tctctccggtttcccttaaagtcaaacatattcggtaatggcaaggagaagaccagcaag
cggtga
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