KEGG   Prunus avium (sweet cherry): 110764218
Entry
110764218         CDS       T05161                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03018  RNA degradation
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110764218
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110764218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110764218
   03041 Spliceosome [BR:pavi03041]
    110764218
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110764218
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110764218
Spliceosome [BR:pavi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110764218
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 110764218
NCBI-ProteinID: XP_021822824
UniProt: A0A6P5T6N6
LinkDB
Position
Unknown
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDSDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcagggaggaaagaaacagtcttggacctggccaagtttgtggacaaaggtgtccaa
gtcaagctcactggtggtagacaagtaacagggactctaaaaggatatgaccagttgtta
aaccttgtcctagacgaagcagtagagtttctaagagattctgatgatccattgaagact
acggatcagaccaggcgccttggcctaatagtttgtaggggaactgctgtaatgcttgtg
tcgccaacagatggtacagatgagattgcgaacccttttagccagccagatggtgcctaa

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