Prunus avium (sweet cherry): 110764540
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Entry
110764540 CDS
T05161
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110764540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110764540
Spliceosome [BR:
pavi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
110764540
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
110764540
NCBI-ProteinID:
XP_021823221
UniProt:
A0A6P5T7S1
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MNCKREHDDDARVNAEGFESDPKRQKWNGHSSPSSSPPPPASEGSLLPGFNYGDEDDEDN
QRRPPVDGYRGDGGDNQRDIKSGAEVEEEEEDDDDDDLEQGLYRRSREIEVRRDCPYLDA
VNRQVLDFDFEKFCSLSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTE
KVYCLPDGYEISDPSLDDIRHVLNPRFTEEQVEQIDKNKQWSRALDGSDYLPGMVGLNNI
KETDFVNVTIQSLMRVTPLRNFFLIPKNYQHCKSPLVHRFGELTRKIWHARNFKGQVSPH
EFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRTSKKDSSIIYECFQGELEVVKE
IPKKGIEKKEIGDDQNTDVVTENNGIVKERYKMPFLMLGLDLPPPPLFKDVMEKNIIPQV
PLFNILKKFDGETVTEVVRPRIARMRYRVTRLPQYLILHMQRFTKNNFFVEKNPTLVNFP
VKNLELKDYIPLSTPKENERLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDL
HVSETLPQMVALSETYMQIYEQQQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtaagagggaacatgacgatgatgctagagtgaacgcggaagggtttgaatct
gacccaaagaggcaaaaatggaatgggcattcatctccttcctcttcaccacctccacct
gcctctgaaggctcccttcttcctggttttaattacggcgatgaggatgacgaggacaac
cagagaaggccacctgttgatggctatagaggggatggtggtgataatcaaagggatata
aaaagtggggctgaagttgaagaagaagaagaagatgatgatgatgatgatcttgaacaa
ggactttacaggcggagccgtgaaattgaggttaggagggattgtccatatcttgacgct
gttaatcgccaggttttggattttgattttgagaagttttgttctctgtctctgtcaaat
ttgaatgtgtatgcatgtttagtttgtgggaagtattaccaaggaagagggaagaagtcc
catgcatatacacatagccttgaagctggacaccatgtttatatcaatcttcgaacggag
aaagtatattgccttccggatggatatgaaatcagtgacccgtcattggatgacattaga
catgtcctgaacccaaggtttactgaggaacaagttgagcagattgacaaaaacaagcaa
tggtctagggcacttgatggttctgattaccttcctggaatggtggggctcaataacatt
aaggagactgattttgtcaatgtgacaattcaatctttaatgagagtcactccactaaga
aacttcttcctcatccctaagaattatcaacattgcaagtctccgcttgttcatcgattt
ggggagctcacgagaaagatatggcatgcacggaacttcaaaggacaggtgagcccacat
gagttcctgcaggcagttatgaaagccagtaagaaacggtttcgaataggagcgcaatct
gacccagttgaattcatgtcatggctgcttaatacactgcatgcagatcttagaacttca
aagaaagatagcagcatcatctatgagtgctttcagggggaactggaggttgtgaaggag
attcctaagaaaggtattgagaagaaagaaattggtgatgaccagaatacagatgttgtg
actgaaaataatggcattgttaaggaaaggtacaaaatgcctttcttaatgcttggattg
gatttgcccccaccacctcttttcaaagatgttatggaaaaaaatatcataccccaggtt
ccactgttcaatattttgaagaaatttgatggggagactgtgactgaagtggtccgacct
cgcatagcaaggatgaggtatcgagtcacccgattaccgcagtatcttattctccacatg
cagcgatttaccaagaacaacttctttgtggaaaagaatccgactttagtcaactttcct
gtgaagaaccttgaattgaaagactacatccccttgtcaacccccaaagagaatgagaga
ttgcgttcaaagtatgatttgattgccaacattgttcatgatggcaaacctggtgaaggt
tcatacagggtatttgtacagagaaagtcggaagaattatggtatgagatgcaggatctt
catgtttcagaaactcttccccagatggttgccctttctgagacttatatgcagatatat
gagcagcagcagtga
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