Prunus avium (sweet cherry): 110764700
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Entry
110764700 CDS
T05161
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110764700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110764700
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110764700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
Motif
Other DBs
NCBI-GeneID:
110764700
NCBI-ProteinID:
XP_021823403
UniProt:
A0A6P5T843
LinkDB
All DBs
Position
Unknown
AA seq
2151 aa
AA seq
DB search
MATSIASQLEAIKSVIQADTEPSVKRPFTRPSILFDAKEAADIDIDTIFSIALQGLDVLV
STDERFRIYKNDLFSQKSRELDRELMGIEENNGINVSISSYLRLLSGYFELPSSIKTLEY
LIRRYKIHVYNFEDLILCALPYHDTHTFVRIVQLISLRNSKWRFMDGVKVSGAPPPRKVI
VQQCIRDKGVLEILCNYASPSKKYRPSRPVIRFCTAVVIEVLGSSTSVDSDVVQRILSLV
VSGLEAGTKGHSENKAGALMIVGLLVSKVTLSPKLVKSLMRSIAEIAREEAKESADLQLF
RLSLMTLINLVQLQAVDIFPIKTLEILMDIRDFAAILLGLFNEFNIDRFVWVLLDSLVDY
SSSNESCQLALISILETIPSKNFVQHAVSKVLSFCLQSSQKIKNSTSSLSGSWAKKILVV
MNEKYQSELQGAVHKFLDEKNVQSKKGGSVHEILGQMLDGNLDMSLAFSESKIWFGLHHP
KADVRRRTLSALGTSGVLEAKATNPQSLVSIEDVILRQLHDDDLTVVRAALSLDRLSTII
SSADLFEALGNVLKRCIGILMSSSLENTSLACDVSVLCLKNASSGIDDNIECCNTLASMI
FPLLLVLPKTQRLNLKALELAKEVKWPLFENLAGASNTALTLQPGSLSSINMDTIASLAG
RFSLHPEEFMPWLIKSSNDFELSKTQFFLVMMQTLLIQKNKSAGFLALFEVGFPALKAEW
EAFESMGDSFIEEFDKDMLNWDCRIFLDKLDSNLKALNANILICLFWRLMEAFLSAMPAD
ISMDNDKKWASWLRDLFVFFSISKFKKVFKEHRHYLVTKCKISAVRFLPRFFTEEDVPPA
VQVESLNCFAYLSLQPEVRLPIQLLAEFPSFLVPLASYNQDIRHAAMNCIEGLHTLWAHV
DSSSKKNGNHATWIHLLDKLLDLMVQQKRLILSDRNFLPSLLASLLSPSCQGFIAPKNVE
LRVDQSTREKILAFILNSALKLPDYAKLVILSLLRGMGNAIIHDREMKSFLSQLLGRRSQ
NYCELHVSSQNLSTIEVQILCLLLESCAMPSSPDEHVLEDHLLEALKLDGLAPEDPAVIQ
PCVTVLQKLNSQIYSGLKTEIQELLFQELVSLFRNANGDIQKETRAALLRLNITCSTIVQ
TLDCMVNNRSCVTDSGYGKKKMKLTGHLKSNPSCDLIFKGENALSLLSSLLDVLLFKKDI
ENRDSLLGPLFKLLYRTFSNEWVHGVLVQDEKQIQVSSTNSDSMSSAISYIQQTLLIILE
DISSSLTNSVPLADNIINEIDVKMLVECAHSVKDGVTRNHVFSLISSITKIIPEKVLGHI
LDIFTLIGESAVTQIDSYSQHVFEDLISTVVPCWLSGTGNNDKLLQIFINVLPEVAEHRR
LSIVVYLLRTLGESNSLASLLVLLFRSLVSRKGLSCFDNMHASDSSTASLQRQWEYALGI
HICEQYSCMIWLPSLVMMLKQIGTGIQSQELFIELLIAMRFTLHKLQDPEFAFKLVSGED
SEKVQATLEELMEQVVSLQQSVDARRKKKGIHVSIRKELKECMHGVLRTITIAMMPPTHF
KSITKLLGHRDRNVAKKALGLLCETVRDHDRVRAKHKYNSSSSHQWQHLDENSLESFRYM
CLKIVDLVDDSSDDSEASLKVAAALALEVVAHKFPTNYSIFNECLPSVTKNISMHDLAVS
SSCLQATGALINVLGLRALSELPHIMENLIRVSHEAFLSSDIKTTSGVDDGLPVVLQIPK
ESLILSILVTLEAVVVKLGGFLNPYLEEITRIMVLHLDYASGSDQKLKIKADSVRRLITE
NIPVRLALPPMLKIFSSTVESGDSSLTVYFGMLENMIGRMDRSSIGGYHAKIFDLCLFAL
DLRHQHPASVQNIDDVEKNVYNAMIALTMKLTESMFKPLFIRSIDWAESDVEDIACAGNI
PRAISFYGLVNKLVENHRSLFVPYFKYLLEGCVRYLTVAGDVKASGSTRKKKAKIQEGKD
NSVLLGNWHLRALILSSLHKCFLYDTGSLKFLDSSNFQVLLKPIVSQLVVDPPLSLEEHP
YIPSVEEVDNLLVACIGQMAVTGGSDLLWKPLNYEVLMQTRSDKVRSRILGLRVVKYLVE
HLREEYLVFLAETIPFLGELLEDVELPVKSLAQSILKDMETMSGESLSQYL
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgattgcgtctcagttagaagccataaaatccgtgatacaagccgacaca
gagccgtcggtcaagaggcccttcactcgcccttccattctcttcgacgctaaagaggct
gctgatatcgatatcgataccattttctccattgcactccaaggtctggatgtccttgta
agcaccgatgagcgatttagaatctacaagaatgacttgttcagccaaaaaagcagagaa
ttggatagagagttgatgggcatagaggaaaataatggcattaatgtttcgataagttca
tacttacgattactctcaggatactttgaactcccatcgtcaatcaagacacttgagtac
ttgatacgccgatataagattcatgtgtacaacttcgaggacttaattttgtgtgctttg
ccataccatgacacccacacatttgttcgaatagttcaattaattagcttgagaaatagt
aaatggagatttatggatggcgtaaaagtttctggtgcaccaccacctagaaaggttatt
gtccagcaatgtattcgtgataagggggttttggagattttatgcaactatgcatcccca
tcgaagaagtataggccttcaaggcctgtgataaggttttgcacggcagttgttatcgag
gttttgggttcctctacatctgttgacagtgatgttgtgcagagaatcctatcacttgtt
gtttctggacttgaggctggcacaaaaggacattcagaaaacaaggctggtgccttgatg
attgttggtttgctagtgagtaaagttacattatctcccaaacttgtcaagagtttgatg
aggtcaattgctgaaattgctcgagaggaggcgaaagagtcggctgatcttcagttgttt
cgcttatcgcttatgactttgatcaaccttgttcagctgcaagctgttgatattttccca
atcaagactttggagattttgatggacattagggattttgctgctatactgttgggactg
tttaacgagttcaatattgatagatttgtatgggtacttttggattctctggttgactac
agttcttctaatgaatcatgccagcttgcgttgatctcgatattagagacaattccttcc
aagaattttgttcaacatgcagtttctaaggtcctatcattctgcttgcaaagttcacag
aaaataaaaaattcaacatcatctttatcaggaagttgggcgaagaagatcttagttgtt
atgaatgagaaatatcaatctgaactacagggagcggttcacaaatttcttgatgaaaag
aatgtacaatctaagaaagggggctcagtacatgaaattttgggtcaaatgttggatggt
aatttggacatgtcactagctttctcagagtcaaaaatttggtttgggttgcaccatcca
aaggctgatgttcgccgtcgcacactatctgcactaggcacatcaggtgttctggaagcc
aaggccacaaacccacagagtcttgtaagcatcgaagatgtcatactgcgacaacttcat
gatgatgatcttactgttgttcgggcagctttgtccttagacagattgtccactataata
agttctgctgacctttttgaagcactgggtaatgtgcttaaaagatgtattggcattctg
atgtcaagttcattggagaacaccagtctagcatgtgatgtttctgttttgtgcctgaag
aatgctagctctggtatcgatgataacattgaatgttgcaatacacttgcttccatgata
tttccgttgctgcttgttctacctaagacacagaggttaaatttgaaagcattggaatta
gctaaggaggtaaagtggccactttttgagaatcttgcaggtgcctccaacacagcattg
acattgcaaccaggaagcctgtcctcaattaacatggacaccattgcaagtttggctggc
aggttctcgttgcaccctgaagaatttatgccttggcttattaagagttctaatgacttt
gagttgtcaaagacacagttcttcttggtgatgatgcagacgcttctcattcaaaagaat
aaatctgctggatttttggccctttttgaagttggttttcctgcattgaaggcggaatgg
gaagcatttgagtcaatgggtgatagctttatagaggagttcgataaggacatgctgaat
tgggattgcagaatattccttgataagctggactccaatttgaaggcattaaatgcaaat
attctaatttgcctattttggaggttaatggaggcatttttatctgcgatgcctgctgat
atctctatggataatgataagaagtgggctagctggcttagggacttgtttgtctttttc
tcaatctctaagtttaagaaagtcttcaaagaacaccgtcattaccttgtcacgaagtgc
aaaatctctgctgttcggttcctgcccaggtttttcacagaagaagatgttccccctgca
gtccaagttgagagtcttaactgttttgcatatctctctcttcaaccagaagttagattg
ccaattcaacttcttgcagaatttccgtcttttcttgttccactggctagttataatcag
gatataagacatgctgccatgaactgtattgaggggttacacacactttgggctcatgtt
gactcttcgagcaagaaaaatggaaaccatgcaacttggattcaccttctcgataagctt
ttggacttgatggttcaacaaaaaaggctcatcttatcagacagaaactttcttccttcc
cttttggcctctttgctcagcccatcctgccagggcttcatagcaccaaagaatgttgag
ctgagggttgatcaatctacaagagagaagattcttgctttcattttgaattctgccctg
aaactgcctgattatgcaaagcttgtgattctatctttgcttagaggaatgggcaatgcc
atcatacatgatagagagatgaagtcatttttatctcagcttttgggaagacgcagtcaa
aattactgtgaactgcatgtctccagccagaatttgtcaacaattgaagttcagatacta
tgccttctactggagagttgtgctatgccttcttcaccggatgagcatgttttagaggat
catttattggaggctttgaagttggatggtttggctccagaagaccctgctgttatacag
ccttgtgtaactgttctgcagaagcttaacagtcaaatatacagtgggctgaagacagaa
atacaggagcttctgtttcaggaacttgtttctttatttcggaatgctaatggtgatata
caaaaggagactcgagcggccttgctgcggttaaatattacttgctctactattgttcag
acgcttgattgcatggtcaacaacagaagttgtgtaactgattcaggttatggaaagaag
aaaatgaagttaacagggcatctgaagtcgaatccatcctgtgatttgatatttaaagga
gagaatgcgctctctctccttagctccctcttggatgtgttgctatttaagaaagacata
gagaacagggattctcttttggggccattatttaagcttctttacagaacattttccaat
gagtgggtacatggtgttcttgtccaggatgaaaagcagattcaagtttcttctacaaat
tctgactccatgtcaagcgcaataagttacatacaacagacgctgctgataatcctggaa
gatattagttcctctctcacaaattctgttccactggcggataacataataaatgagatt
gatgtcaaaatgttggttgagtgtgcccattcagtgaaggatggagttactcgcaaccat
gtattttcactaatttcctctatcacaaagattattccagaaaaggttttggggcatata
ctggatatttttactcttataggagaatcagcagtcacacagattgacagttattcgcag
catgtgtttgaggatcttatatctacagttgttccatgttggttgtctgggacaggcaac
aatgacaagttgctccagatatttatcaatgtattgcctgaagttgctgaacatagaagg
ctatcaatcgttgtatacctactcaggactttgggagagtcaaatagcttggcttcatta
cttgtgcttctcttccgttcattggtttcacgaaaaggattatcgtgctttgataacatg
catgcttcagatagctccacagcttcattacagagacagtgggagtatgccctggggatc
cacatatgtgagcaatattcatgcatgatatggcttccctctctggtaatgatgcttaaa
caaataggaacaggtattcagtctcaagaactgtttatcgaattgttaattgcgatgcgg
ttcaccttacacaaattgcaagatccagagtttgcattcaagcttgtatcaggggaagat
tcagaaaaagttcaggctacattggaagaactcatggagcaggttgtctctctccagcaa
tctgtagatgcaagaaggaagaaaaagggtatccatgtctctattaggaaagagttgaag
gagtgcatgcatggtgtattaaggactattactatagccatgatgcctccgacacacttc
aaaagcataactaagttgcttggccatagagatagaaatgttgcaaagaaggctcttggt
ctcctatgtgaaacagttagggatcatgacagggtcagggcaaagcataaatataactca
agttccagtcatcagtggcagcatctagacgagaattctcttgaatcatttcgctatatg
tgtttgaaaattgttgatttagttgatgattcatcagatgattctgaagcctccttgaag
gtggcagcagctttggctctagaagttgtggcccataagtttcctactaattattccatc
ttcaatgagtgtctaccgtcggttacaaaaaatatcagtatgcatgacttggcagtgtcc
tcaagctgccttcaagcaactggtgctttgatcaatgtgcttgggcttagggcactatct
gagcttcctcacataatggaaaatttgattagggtttctcatgaagcatttttatcttca
gatataaaaactacatctggggttgatgatggcttgcctgttgtgttacaaatacccaag
gaatctcttattttatctattctagtcactttagaggctgtcgtggttaagctagggggt
ttcttgaacccatatctagaggaaattacaagaattatggtgcttcatcttgattatgcg
tcagggtctgatcagaagctgaaaataaaagctgactcagtacgaagactcatcactgag
aacatccctgttcgacttgctctaccacccatgttgaaaatattctccagtacggttgag
tctggtgattcgagtttaacagtttattttggaatgctggaaaacatgattggtagaatg
gataggtcatctattggtggttaccatgctaagatttttgacttgtgcttgtttgctctt
gatctacgccaccaacatcctgcatctgttcagaatattgatgatgtagagaaaaatgta
tacaatgcaatgattgctcttactatgaaactcacagagtccatgttcaagcctcttttc
attaggagtattgattgggcggagtcagatgtggaagatattgcatgtgcaggaaatata
cctagggctatatctttctacggcttggtaaataaacttgtggagaaccatcggtctctt
tttgttccttacttcaaatacttgctcgagggttgtgtacgttacctaactgttgctgga
gatgtgaaggcttccggttcaacacgaaagaagaaggctaagattcaggaggggaaggac
aacagcgtgttgcttggaaactggcatctcagggctttgatactatcatcattacataaa
tgttttctctatgatactggaagcttgaagtttcttgactcttcaaattttcaggttctt
ttgaaacccattgtttcacagcttgtcgtagatccacctttgtctctagaagagcatccc
tacataccatctgtggaggaagtcgataatttattggttgcttgtattggccaaatggct
gtgactggaggaagtgaccttttatggaagccgttgaattatgaggtgctgatgcagaca
cgaagtgataaggttcggtcccgaattttgggcctgagagttgtgaaatatttggtggag
catctgagagaagaatatctggtattcctggctgaaaccattcccttcttgggtgaattg
cttgaggatgtggagctccctgttaaatctcttgcacagtcgattctcaaggatatggag
accatgagtggtgaaagcctcagccagtatctgtga
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integrated database retrieval system
