KEGG   Prunus avium (sweet cherry): 110765296
Entry
110765296         CDS       T05161                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110765296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pavi03009]
    110765296
Ribosome biogenesis [BR:pavi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    110765296
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Utp12 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ASA1 CFAP251_N ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_IFT140_1st PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF4 PAC11 Beta-prop_HPS5 WDR54 Beta-prop_IP5PC_F Beta-prop_Nup120_160 Beta-prop_LRRK2 PROPPIN Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_WDR19_1st Utp8_b_propeller Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N KNTC1_N WD40_RFWD3 CDtoxinA Rhamnogal_lyase TRM82_WD
Other DBs
NCBI-GeneID: 110765296
NCBI-ProteinID: XP_021824075
UniProt: A0A6P5TAK5
LinkDB
Position
Unknown
AA seq 956 aa
MVKSYLRYEQAAVFGVIVSVDSNITYDSSGKHLLAPALEKVGVWHVRQGVCTKTLIPAVP
TKGHSLSVTSIASSHTSLVASGYADGSIRIWDSDKGTCETTLNGHKGAVTALRYNKLGSM
LASGGKDNDIILWDVVGETGLYRLRGHRDQVTDLVFLDSDKKLVSSSKDKFLRVWDLETQ
HCMQTISGHHSEVWSIDSDPEERYLVTGSADPELRFYTIKHDMEDGQSISNVSGTEIVNG
GDPPTQNKWEVLKLFGEVRRQSKDRVATVRFNKSGNLLACQVAGKTVDVFHVLDEAESKR
KAKRRLHRKKEKKSAKGAPEVMENGDTNRGAGEDGNSLVVTVPDVFKLLQTIRASKKICS
ISFCPNTPKSSLATIALSLNNNLLEFYSVESNATTKTHAVELQGHRSDVRSVTLSSDNSL
LMSTSHNAVKIWNPSTGSCLRTIDSGYGLCGFIFPNSKYALVGTKGGTMEIIDIGSGTSI
EVVEAHGGSVRSIAAIPNENGFVTGSADHDVKFWEYQFKQKSAQDSKQLMVSNVRTMKMN
DDVLVVAVSPDAKYVLVALLDCTVKVFFLDSLKLFLSLYGHKLPVLCMDISSDGDLIVTG
SADKNLKIWGLDFGDCHKSIFAHADSVMGVQFVRNTHYMFSVGKDRLVKYWDADKFELLL
TLEGHHADVWCLAISNRGDFIVTGSHDRSIRRWDRTEEPFFIEEEKEKRMEEMFESDLDN
AFENRYAPNEEIPEEGAVALAGKKSKETITATDSIIDALDIAEVELKRIAEHEEEKSRGK
VAEFQPNIVLLGLSPSDYVIRAVSSVQTNDLEQTLLALSFSDALKLLSYSKDWILHPDKV
ELICRVVTLLVQTHYNQLHSTPAARPVLGALTEIHPRVKECKDIIGYNLAAMEHIKQVKA
SKSGALFQDAKSKLQEIRAQHSKRLETKTDLREENGRKRRRKNKNSSDVHVRLFDK
NT seq 2871 nt   +upstreamnt  +downstreamnt
atggtgaagtcgtaccttcggtacgagcaggcggcggtctttggcgtcatcgtctccgtc
gattcgaacatcacctacgacagctccggaaagcaccttctcgctccggctctggaaaag
gtcggcgtgtggcacgtacgacaaggcgtttgcactaaaaccctaatccctgctgttccc
actaaagggcactctctctccgtcacctctatcgcgtcctcgcatacttctctggtagct
agtgggtatgctgatggtagtataagaatttgggattctgacaaaggaacctgcgagaca
acattgaatggacataaaggagctgtcactgccttacggtacaacaagcttggatctatg
cttgcatctggaggcaaagataatgacattatattgtgggatgtagttggtgagactggc
ctatatcgccttcgtgggcatcgagatcaggtcactgaccttgtcttcttggattctgat
aaaaaactcgtcagttcatcgaaagataaatttttgagggtgtgggatcttgaaacccag
cattgcatgcagacaattagtggccatcatagtgaagtatggtccatagacagcgatcca
gaagaaagatatttggtcactgggtcagcggatccagaactgaggttttacaccattaag
catgacatggaagatggccaatccatttctaatgtgagcggaactgaaattgtgaacggt
ggtgatccacccacccaaaataaatgggaagttttgaagctgtttggtgaagttcggcgg
caaagcaaggatagagttgcaactgtgagattcaacaagtctggaaatttgctggcctgc
caagtggcaggaaagacagtagatgtattccacgtactggatgaggctgaatcaaagcgt
aaggcaaaacgtaggcttcaccggaagaaagagaaaaaatcagcaaaaggggcacctgag
gtgatggaaaatggagacacaaatcgtggagctggagaagatggaaatagtcttgtggtt
acagttcctgatgtctttaagcttcttcaaactattcgagctagcaaaaagatatgttct
atctctttctgtccaaacactccaaagagttcgctagctacaatagctttgtctttgaac
aataatttattggaattttattctgttgagagcaacgcaacaacaaaaacacatgctgta
gagctccaaggacatcgatctgatgtcagaagtgtaacacttagctcagacaattcactc
ttgatgtcaactagtcacaatgcagtaaaaatttggaatccaagtactggttcctgcctt
cgaactattgattccggatacggcctgtgtggttttatctttcctaatagcaagtatgca
cttgttggaactaaaggtggaacaatggaaattattgacattggtagtggcacttccatt
gaagtagtggaagctcatggtggctctgttcgttccattgcagccattcccaatgaaaat
ggttttgtgacaggaagtgcagatcatgatgttaagttttgggaatatcaatttaaacaa
aagtctgcccaagattctaagcaactaatggtgtcaaatgtaaggactatgaagatgaac
gatgatgtccttgtggttgctgtcagccctgatgccaaatatgttttggttgctctgttg
gattgcacagtgaaggttttctttttggattcgctcaaacttttcctttccttatatggt
cacaagcttcctgttctatgtatggacatttcatctgatggagatctgatagtgactgga
tctgctgacaaaaatttgaagatttggggtttagattttggtgattgtcataaatccata
ttcgctcatgctgacagtgtcatgggagtgcaatttgtacgaaatacacattacatgttt
agtgttgggaaagatcgcctagtaaaatactgggatgctgacaaatttgagttgctttta
actcttgagggacaccatgctgatgtttggtgccttgcaattagtaaccgtggcgatttc
attgtcacggggtctcatgaccgatcaatacgtcgttgggatcgtactgaagagccattt
tttattgaggaagagaaagaaaaaaggatggaagagatgtttgagtctgacctcgataat
gcgtttgagaacaggtatgcacccaacgaagaaatccctgaggagggagctgtggcctta
gcagggaagaaatcaaaagaaacaattaccgcgactgattcaattattgatgcactagat
atagcagaggtagaattgaagcgaattgccgaacatgaggaggagaaaagcaggggaaaa
gttgctgagtttcaaccaaatattgttttgcttgggctctctccatctgattatgttatt
cgcgcagtttcaagtgtccagacaaatgatctggagcagacactactggctttatcattc
tcagatgctttgaagctcttgtcttactcgaaggactggattttgcatcctgataaggtt
gaactcatctgcagagttgttacattgctagtacagacgcattataatcagttgcatagt
acacctgcagctagacctgtgttgggtgctttgacagagattcatccgagagttaaggaa
tgcaaagatatcattggttacaaccttgcagcaatggagcatattaagcaagtgaaggct
tcaaaatcaggtgcattatttcaagatgcaaaatcaaagttacaagaaattcgcgctcaa
cattctaagcgactagaaacaaagacagatctgagagaagaaaatggaagaaagagaagg
agaaagaacaagaattcaagtgatgtacatgttagattgttcgacaaatga

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