Prunus avium (sweet cherry): 110765296
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Entry
110765296 CDS
T05161
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110765296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110765296
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110765296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Utp12
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ASA1
CFAP251_N
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
PAC11
Beta-prop_HPS5
WDR54
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_LRRK2
PROPPIN
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Utp8_b_propeller
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
KNTC1_N
WD40_RFWD3
CDtoxinA
Rhamnogal_lyase
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
110765296
NCBI-ProteinID:
XP_021824075
UniProt:
A0A6P5TAK5
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MVKSYLRYEQAAVFGVIVSVDSNITYDSSGKHLLAPALEKVGVWHVRQGVCTKTLIPAVP
TKGHSLSVTSIASSHTSLVASGYADGSIRIWDSDKGTCETTLNGHKGAVTALRYNKLGSM
LASGGKDNDIILWDVVGETGLYRLRGHRDQVTDLVFLDSDKKLVSSSKDKFLRVWDLETQ
HCMQTISGHHSEVWSIDSDPEERYLVTGSADPELRFYTIKHDMEDGQSISNVSGTEIVNG
GDPPTQNKWEVLKLFGEVRRQSKDRVATVRFNKSGNLLACQVAGKTVDVFHVLDEAESKR
KAKRRLHRKKEKKSAKGAPEVMENGDTNRGAGEDGNSLVVTVPDVFKLLQTIRASKKICS
ISFCPNTPKSSLATIALSLNNNLLEFYSVESNATTKTHAVELQGHRSDVRSVTLSSDNSL
LMSTSHNAVKIWNPSTGSCLRTIDSGYGLCGFIFPNSKYALVGTKGGTMEIIDIGSGTSI
EVVEAHGGSVRSIAAIPNENGFVTGSADHDVKFWEYQFKQKSAQDSKQLMVSNVRTMKMN
DDVLVVAVSPDAKYVLVALLDCTVKVFFLDSLKLFLSLYGHKLPVLCMDISSDGDLIVTG
SADKNLKIWGLDFGDCHKSIFAHADSVMGVQFVRNTHYMFSVGKDRLVKYWDADKFELLL
TLEGHHADVWCLAISNRGDFIVTGSHDRSIRRWDRTEEPFFIEEEKEKRMEEMFESDLDN
AFENRYAPNEEIPEEGAVALAGKKSKETITATDSIIDALDIAEVELKRIAEHEEEKSRGK
VAEFQPNIVLLGLSPSDYVIRAVSSVQTNDLEQTLLALSFSDALKLLSYSKDWILHPDKV
ELICRVVTLLVQTHYNQLHSTPAARPVLGALTEIHPRVKECKDIIGYNLAAMEHIKQVKA
SKSGALFQDAKSKLQEIRAQHSKRLETKTDLREENGRKRRRKNKNSSDVHVRLFDK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcgtaccttcggtacgagcaggcggcggtctttggcgtcatcgtctccgtc
gattcgaacatcacctacgacagctccggaaagcaccttctcgctccggctctggaaaag
gtcggcgtgtggcacgtacgacaaggcgtttgcactaaaaccctaatccctgctgttccc
actaaagggcactctctctccgtcacctctatcgcgtcctcgcatacttctctggtagct
agtgggtatgctgatggtagtataagaatttgggattctgacaaaggaacctgcgagaca
acattgaatggacataaaggagctgtcactgccttacggtacaacaagcttggatctatg
cttgcatctggaggcaaagataatgacattatattgtgggatgtagttggtgagactggc
ctatatcgccttcgtgggcatcgagatcaggtcactgaccttgtcttcttggattctgat
aaaaaactcgtcagttcatcgaaagataaatttttgagggtgtgggatcttgaaacccag
cattgcatgcagacaattagtggccatcatagtgaagtatggtccatagacagcgatcca
gaagaaagatatttggtcactgggtcagcggatccagaactgaggttttacaccattaag
catgacatggaagatggccaatccatttctaatgtgagcggaactgaaattgtgaacggt
ggtgatccacccacccaaaataaatgggaagttttgaagctgtttggtgaagttcggcgg
caaagcaaggatagagttgcaactgtgagattcaacaagtctggaaatttgctggcctgc
caagtggcaggaaagacagtagatgtattccacgtactggatgaggctgaatcaaagcgt
aaggcaaaacgtaggcttcaccggaagaaagagaaaaaatcagcaaaaggggcacctgag
gtgatggaaaatggagacacaaatcgtggagctggagaagatggaaatagtcttgtggtt
acagttcctgatgtctttaagcttcttcaaactattcgagctagcaaaaagatatgttct
atctctttctgtccaaacactccaaagagttcgctagctacaatagctttgtctttgaac
aataatttattggaattttattctgttgagagcaacgcaacaacaaaaacacatgctgta
gagctccaaggacatcgatctgatgtcagaagtgtaacacttagctcagacaattcactc
ttgatgtcaactagtcacaatgcagtaaaaatttggaatccaagtactggttcctgcctt
cgaactattgattccggatacggcctgtgtggttttatctttcctaatagcaagtatgca
cttgttggaactaaaggtggaacaatggaaattattgacattggtagtggcacttccatt
gaagtagtggaagctcatggtggctctgttcgttccattgcagccattcccaatgaaaat
ggttttgtgacaggaagtgcagatcatgatgttaagttttgggaatatcaatttaaacaa
aagtctgcccaagattctaagcaactaatggtgtcaaatgtaaggactatgaagatgaac
gatgatgtccttgtggttgctgtcagccctgatgccaaatatgttttggttgctctgttg
gattgcacagtgaaggttttctttttggattcgctcaaacttttcctttccttatatggt
cacaagcttcctgttctatgtatggacatttcatctgatggagatctgatagtgactgga
tctgctgacaaaaatttgaagatttggggtttagattttggtgattgtcataaatccata
ttcgctcatgctgacagtgtcatgggagtgcaatttgtacgaaatacacattacatgttt
agtgttgggaaagatcgcctagtaaaatactgggatgctgacaaatttgagttgctttta
actcttgagggacaccatgctgatgtttggtgccttgcaattagtaaccgtggcgatttc
attgtcacggggtctcatgaccgatcaatacgtcgttgggatcgtactgaagagccattt
tttattgaggaagagaaagaaaaaaggatggaagagatgtttgagtctgacctcgataat
gcgtttgagaacaggtatgcacccaacgaagaaatccctgaggagggagctgtggcctta
gcagggaagaaatcaaaagaaacaattaccgcgactgattcaattattgatgcactagat
atagcagaggtagaattgaagcgaattgccgaacatgaggaggagaaaagcaggggaaaa
gttgctgagtttcaaccaaatattgttttgcttgggctctctccatctgattatgttatt
cgcgcagtttcaagtgtccagacaaatgatctggagcagacactactggctttatcattc
tcagatgctttgaagctcttgtcttactcgaaggactggattttgcatcctgataaggtt
gaactcatctgcagagttgttacattgctagtacagacgcattataatcagttgcatagt
acacctgcagctagacctgtgttgggtgctttgacagagattcatccgagagttaaggaa
tgcaaagatatcattggttacaaccttgcagcaatggagcatattaagcaagtgaaggct
tcaaaatcaggtgcattatttcaagatgcaaaatcaaagttacaagaaattcgcgctcaa
cattctaagcgactagaaacaaagacagatctgagagaagaaaatggaagaaagagaagg
agaaagaacaagaattcaagtgatgtacatgttagattgttcgacaaatga
DBGET
integrated database retrieval system