Prunus avium (sweet cherry): 110765338
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Entry
110765338 CDS
T05161
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110765338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110765338
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110765338
Prokaryotic type
Archaeal type
TFB
110765338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
110765338
NCBI-ProteinID:
XP_021824128
UniProt:
A0A6P5TA66
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MRCPYCLAGQGRCATTTNSRRSITECTSCGRVVEERQSQFHHLFHLRAQDNPLCLVTSDL
PTLHHQAQPNNAAAADEDPFEPTGFITAFSTWSLEPNPLFLRSSLSFSGHLAELERTLES
TSSSSSSSPSSSTVVVDNLRAYMQIIDVASILGLEYDISDHAFQLFRDCCSTTCLRNRSV
EALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH
MPRFCTLLQLNKSAQKLATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEI
CKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSTSKVDLVEI
PVYLEREKLSEIKPIKPNEGLDMNVPAIGKEEFELKGNSRGAQTTVLNQSTTFWQHQVPY
GTSGLRTAGKNSHNGTEGMDIDEPQRNQQPNQQFEQKMGMDSNGLTSTRKPTQILSPPAS
GACSVTRQFRCPPPSSGSSPNVLYVLPPKLAPGYTELRGSGSQNGSENAKQSGDA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcccgtactgcttggccgggcaaggccggtgcgcgacgacaacaaactcccgt
cgttcgataacagagtgcacgtcgtgtggtcgtgtggtggaagagcgccaatcccaattc
caccacctcttccaccttcgcgcccaagacaaccctctctgcctcgtcacctccgacctc
cccaccctccaccaccaagcccaacccaacaacgccgccgccgccgacgaagacccgttc
gagcccaccggattcatcaccgccttctcgacatggtccctggagcccaacccgctcttc
ctccgctcctctctctccttctctggccacctcgccgagctcgagcgcaccctcgaatcc
acctcctcttcttcttcttcatccccgtcgtcttccaccgttgtggtcgataatctcagg
gcctacatgcaaatcatcgatgtcgcttcgatcctgggcttggaatacgacatctcggac
cacgcgtttcagctcttcagggactgttgctccactacttgcttgaggaatcgcagcgtt
gaagctctcgcaactgctgcccttgtgcaggccatcagagaagcccaagagcccagaacc
ctccaggaaatctcaattgcagccaatgtgccccagaaggaaattggtaagtacatcaag
atacttggagaagcactgcaacttagtcagcccatcaacagcaactccatatccgtccat
atgcctcggttttgcactctcctccagctcaataaatctgctcagaaactggcaactcac
attggagaggttgtcataaacaaatgcttctgcactcgtaggaaccccattagcatctcc
gcagctgcaatatatttagcctgccagcttgaagacaagcgaaaaactcaggcagagatt
tgtaaggtgactggtcttactgaagtcactctccggaaagtttacaaggagctgttggag
aattgggatgacttgctcccatctaattatactccagccgttcctccagaaagagcattc
cctaccactgtaatcgcttcaggccgttcttcaacatctaaagttgatttagttgaaata
ccagtttatttggagagagagaagctgtctgaaataaaacctatcaaaccaaatgaggga
ttagacatgaatgttccggccataggtaaagaggagtttgagcttaaaggtaattctcga
ggtgcgcaaaccactgttttgaatcaatcaacaactttctggcaacaccaggttccatat
ggtacttctggtttaaggacggcaggaaagaactctcataatggcaccgaaggaatggac
atcgatgagccgcaacgtaaccagcagcctaaccaacagttcgagcagaagatgggtatg
gactcaaacggtcttactagtacacgaaagccaactcaaattttgagccccccagcttca
ggtgcatgctcagttaccaggcagtttcgttgccctccaccgtcatcaggttcttctcca
aatgttttgtatgtgctgccaccaaagctggcaccaggttatactgagcttagaggtagc
gggagtcaaaatggaagtgaaaatgccaaacagagtggagatgcctag
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integrated database retrieval system
