Prunus avium (sweet cherry): 110765437
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Entry
110765437 CDS
T05161
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110765437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110765437
03012 Translation factors [BR:
pavi03012
]
110765437
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110765437
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110765437
Translation factors [BR:
pavi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110765437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
NACHT
nSTAND3
AAA_19
Dicer_dimer
ATPase
T2SSE
PhoH
AAA_11
Motif
Other DBs
NCBI-GeneID:
110765437
NCBI-ProteinID:
XP_021824254
UniProt:
A0A6P5TAP2
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MPSPSLAFLFLPSPSLQFAAAPSHPKPIAFETSPSPSPSLLAMKDRPPSSYGAVYVPPHH
RLRSVITSPNYTSAASIGSKLRENQSAALNRRSTNGTLTYYQTQQQEQLQKPKLQHNSAY
DDGVSEEGSDREVELPSRPTQGASPSDNIDDWKRKLTMLLRDKEKQELVSREKRDRRDFE
KIAALASRMGLYSHLYAKVAVFSKVPLPNYRFDLDDRRPQREVTLPLGLLRRVEGYLGEF
LSQKSRTKEGLPDASFSRSNSSGSIATDEGLFEQPESLASSKVVMEKILWRRSLQLRDKQ
QAWQESPEGRKMLELRRSLPAYKEKDALLTAISRNQVVIISGETGCGKTTQIPQFILESE
IEAVRGAVCSIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGMKGRDTRLLFCT
TGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLDS
ELFSSYFGRAQIIHVPGFTYPVRTHFLEDVLEITGCRLTPYNQIDDYGQEKMWKMSKQAP
RKRKSQIASVVEDALKAADFNGYGPQTQESLACWNPDCIGFNLIEYLLCNICESERPGAI
LVFMTGWDDINSLKEKLYANPLLGDSSRVLLLACHGSMASSEQRLIFDEPEDGVRKIVLA
TNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGE
CYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLNLGSISEFLSRALQSPELLAVQNA
IEYLKIIGALDENENLTVLGRYLTMLPVEPKLGKMLLVGAIFNCLDPVLTIVSGLSVRDP
FLTPFDKKDLAEAAKSQFSRDYSDHLALVRAYEGWKVAERDFAGYDYCWKNFLSAQSMKA
IDSLRKEFFSLLRDTDLVDANTTTHNAWSYDEHLIRAVICYGLYPGICSVVHNEKSFLLK
TMEDGQVLLYSNSVNAREPKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFGGSFSKG
AIDGHLKMLGGYLEFFMKPPIAEMYQCLKGELDELIQTKLLNPRMDTHAFHELLSAVRLL
LSEDQGEGRFVFGRQVLTSSKPSVLAAQPASALVSRTDSGPGGDNSKSQLQTLLTRAGYA
APTYKTKQLKNSQFRATVEFNGMEIMGQPCNNKKSAEKDAAAEAIQWLVSGTQMGHGYIN
HMSMMLKKSKRDHN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaccatctctagcttttctctttcttccatctccttctctccaattcgccgcc
gcaccttcacatcccaaacccattgccttcgaaacctcaccctcaccctctccctcactc
ctcgcgatgaaggaccggcctccttcttcgtacggcgccgtttacgttcctccgcaccat
cgcctccggtcagtcatcactagccctaattacacctctgctgcttcaattggctccaaa
ctccgcgagaaccagagtgctgctctgaaccgtaggagcaccaatggtactctgacttac
taccagactcagcagcaggagcagctgcagaagcccaagttgcagcacaattctgcttac
gacgacggcgtttccgaggaagggtccgatcgcgaagttgagttgccatcgcgtccgact
cagggtgcttccccgtctgataacattgatgattggaaacggaaactaacaatgctgtta
cgcgataaggagaagcaagagttggtttcaagggagaaaagagatagacgtgattttgag
aaaatagctgctttggcaagcagaatggggctttatagccatctatatgcaaaggttgct
gtatttagtaaggtcccactgccaaactacagatttgacctcgatgacaggcgccctcag
agagaggtgaccttgcctcttgggttgctgaggagagttgagggctatcttggagaattc
ctttctcagaagtctaggacgaaggaagggcttccagatgcttccttttctagatcaaac
agtagtggcagcattgctactgatgaagggctttttgagcaaccagaatcattggcgtct
agtaaggttgtaatggaaaaaattctttggcggagaagcttgcagctgcgtgataagcaa
caagcttggcaggaatctcctgaaggtagaaaaatgctggaacttcggagaagtctccct
gcctataaagagaaggatgcattgttaactgcaatttcacggaatcaggttgttatcata
tcaggtgaaactggctgtggcaagaccactcaaattccacaattcattctagaatctgag
atagaagctgttcgtggagctgtttgtagtattatatgtacacagcctagacgaatatct
gctatgtctgtttctgaaagagttgcttcagagagaggggagaaattgggtgaatcagtt
gggtataaggttcggttagagggtatgaaagggagggacacccgccttctcttttgcacc
actggcattttgttgagaagattactggttgatagaaatttgaaaggtgtaactcatgtg
attgtggatgaaattcatgaacgtggaatgaatgaagattttctgcttattgttctcaag
gatctcctacctcgtcgaccagaactgaggctgattctgatgagcgcaaccctagattct
gagcttttctcatcctactttggtagggctcagataattcatgttccaggttttacatat
ccagttcgaactcattttctggaggatgttctggaaattacgggctgcagattaactcca
tacaatcagattgatgattatggtcaagaaaagatgtggaaaatgagcaaacaggcaccg
agaaagaggaaaagccaaattgcatctgttgttgaggatgcacttaaagcagccgatttt
aatgggtatggtccccagactcaggaatctctagcatgttggaatcctgattgtatcggt
tttaatctcatagagtatcttttgtgcaatatctgtgagagtgaaaggcctggtgctatt
ctagtttttatgactggatgggatgacatcaactctctgaaggaaaagttatatgccaat
cctctcttaggtgattcaagccgagtcttgttgctagcatgccatggttctatggcaagt
tctgagcagaggttaatatttgatgagcctgaggatggagtgaggaaaatagtgctggct
actaatattgctgagacaagcatcacaattaatgacgttgtttttgttcttgattgtgga
aaggcaaaagagacttcatatgacgcactgaataatactccttgtttgcttccttcctgg
atttccaaggtgtctgctcaacaaagaagaggaagagctggacgtgtccagcctggggaa
tgttatcatctctatcctagatgtgtatatgatgcatttgcagagtatcaattgccagaa
attttgagaacgcctctgcagtctctctgtctgcaaataaaaagtttaaacctaggaagc
atttctgagttcttatctagggctctgcagtcaccagagttactcgcggtgcaaaatgcc
atagagtatttaaagatcattggggccttagatgagaacgagaatctgactgttttagga
cgctatctaactatgcttcctgtggagccaaaacttggaaagatgctcttggtgggcgcc
atcttcaactgcctggatccagttttaactattgtttctggccttagtgtcagagatcct
ttcctaacaccatttgacaagaaagaccttgctgaggctgcaaagtcacagttttcacga
gattatagtgatcaccttgctcttgtgcgggcctatgagggctggaaggttgctgaaaga
gactttgctggatatgactactgctggaagaactttctttcagcacaatcgatgaaagcc
attgattctcttaggaaggaattcttctctttgctcagagatactgatcttgttgatgcc
aacaccaccacccataatgcatggagttatgatgagcatctcatccgtgcagttatttgc
tatggcctgtatcctgggatttgctctgttgtgcacaatgagaagtcatttctgctgaaa
actatggaggacggtcaggtgctgctatactcgaactctgtcaatgctcgggaacctaaa
attccatatccatggctggttttcaatgagaagataaaagtgaactctgttttcctacgg
gattcaacagctgtgtctgactcagtgctcctcctatttggtggaagtttttcaaaaggg
gctatagatggacacttgaaaatgctgggaggatatctggagttcttcatgaaacctcct
atagcagaaatgtatcaatgtttaaaaggggaacttgatgagttaattcaaaccaaacta
ctgaaccccaggatggacacacacgcatttcatgaactcctttctgcagtgcggttgctg
ctctcagaggatcaaggagagggtagatttgtatttggccgccaggtccttacatcctca
aagccatctgtgttggcagcacagccagcctcagccttggtttcaagaactgacagtgga
cctgggggtgataattctaagagtcagctccagacattgctcacaagagcaggatatgct
gcacccacctacaaaactaagcaactgaagaacagccagttccgagctacagtagagttc
aacggaatggaaattatgggccagccttgtaataacaagaagagtgcagaaaaagatgca
gcagctgaggccatccagtggctggtgagtggaacacaaatgggccatggttacatcaat
cacatgtcaatgatgttgaagaaaagcaaaagggaccataattaa
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integrated database retrieval system
