Prunus avium (sweet cherry): 110765608
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Entry
110765608 CDS
T05161
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110765608
Spliceosome [BR:
pavi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110765608
Other components
Complex C specific factors
110765608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
110765608
NCBI-ProteinID:
XP_021824450
UniProt:
A0A6P5TBA1
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MDDYQEMERFGMEKDYEDGQWIGSEFYYRKRKDKRVQTKDDVLYGIFSADSDDDDEDNEG
SRKRRKDRKVVDLTKPVNFVSTGIVMPNQEMDNNSKQQNDDLGATGVATSGLGFGAATAS
GLGFNNLNSGLGFNSNSDPTGGEEEDEENDSNFLPTAFGKKIKEGAERRQKEREKLKLLK
QTTIQSRSRRDSEESQFGLGGARGGGGDGGLGAFEKHTKGIGMKMLKNMGYKGGGLGKSQ
QGILAPIEAKLRPKNMGMGFNDYEETKIKRPGLQELEAEKPSKPLPAASSSTTTKKSLSW
KKAVANRANKDHYVSAKELLAKKQEESTEVFVHKVVDMRGPQVRVLTNLENLNAEEKARE
EDIPMPELQHNLRLILDLAELDIQKIDRDLRNERDTAISLNQEKERLATEVARQKQHLDS
LGDIMSVLDRLGEENIMGTLTLDSLAKDFGDLQKRYADDYKICNLSCIACSFALPLFIRM
FQGWDPLRNPSHGLNVVSSWKGLLHGEGEREQYLDIWDNTMPPYTQLVSEVVVPAVRIAG
INTWQAKDPEPMLRFLESWEKLLPSSVLHAILDMVVFPKLKDAVDLWEPHRDTVPIHVWV
HPWLPLLGHKLEELYHTIRFKLSNVLGAWHPSDASAYTILSPWKKVFDSASWEQLMHRFI
VPKLQLVLQDFQVNPANQRLDQFNWVMSWASAIPIHLMVDMMEKFFFTKWLQVLYHWLCS
NPNFEEVLNWYKGWKELIPEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYL
RVLEQRQFEAQQKAAAAQANLGGTAHMDGSGNEMSLKDVIEAHAQQHGLLFRPKPGRMHN
GHQIYGFGNVSIIVDSLNQKVYAQTEESWSLVSLERLLDMHNSSLTRRR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaagagatggaaaggtttggcatggagaaggattacgaggacggccaa
tggatcggcagcgagttctattatcgcaagcgcaaggataagcgcgtccagaccaaagac
gatgtactctatggcatattctctgccgattccgacgacgacgatgaagacaacgagggc
tccagaaaacgcaggaaagatcgaaaggtcgtcgacctcaccaagcccgtcaatttcgtc
tccaccggcatcgtcatgcccaaccaggagatggacaacaattcaaagcagcaaaacgat
gacctcggcgctaccggcgttgccaccagtggccttggctttggtgccgctacggcttca
ggtttgggttttaataatttgaattccggtttaggttttaattcgaattcggatcccacc
ggtggagaggaggaggatgaggaaaatgacagcaattttctgccgacggcgtttgggaag
aaaataaaggagggagcagagaggagacagaaggagagggaaaagctcaaattgctgaag
cagactactatccaatctcgaagtcgaagagattctgaagaatctcagtttggactagga
ggagcaagggggggcggcggggatgggggcctgggggcctttgagaaacacaccaagggc
attgggatgaagatgcttaagaacatgggctacaaaggaggtggacttggcaagagccag
caagggattctcgctcctattgaagccaagttgaggccaaaaaatatgggtatgggtttt
aatgattacgaggagactaaaatcaagaggcctggcttgcaagaattggaagctgaaaag
ccgagcaagcctttgcccgcggccagttcctccaccaccaccaaaaagagcctttcctgg
aaaaaggccgttgccaacagggctaataaggaccactatgtctctgccaaggagttgtta
gccaagaagcaggaagagagtaccgaggtctttgtgcacaaggtggttgatatgcgcgga
ccccaggttcgagtcttgaccaatttggagaatttgaatgccgaagagaaagcgagggaa
gaggatattcccatgcctgagctacagcacaacctgaggttgattctggacttagctgag
ctggatattcagaagattgatagggatctgaggaatgagagggacacggcgatcagcttg
aaccaggagaaagagaggctggcaacggaggtagccagacagaagcaacacttggatagc
ttgggggatattatgagcgtgttagaccgactgggagaagagaatatcatgggaacattg
acgctggactccctggcaaaggactttggtgacctacagaagagatacgctgacgactat
aaaatatgtaacttgtcttgtattgcctgttcttttgctctacctctgtttatcaggatg
tttcaaggttgggatcctcttaggaacccgtcccatgggttgaatgtggtatcctcatgg
aagggtttgcttcatggagagggggagagagaacagtaccttgatatttgggataataca
atgccgccttacacccaattggtttccgaggttgtggtacccgccgtgaggattgctggc
atcaatacctggcaggccaaggaccctgaacccatgcttcgctttttggagtcttgggag
aaattgctaccttcttctgtccttcatgccatattggatatggtagtctttcccaaactg
aaggacgcagttgacttgtgggaacctcaccgggacactgttcccatccatgtgtgggtg
catccatggctaccacttttgggacacaagttggaggagttgtatcacacaatacgcttc
aagttgagtaacgttctcggtgcatggcaccccagtgatgcctctgcctataccatactc
tcgccgtggaagaaggtgtttgattcagccagttgggaacagctcatgcatagatttata
gtacccaagttgcagcttgtcctacaagacttccaagtgaaccctgcaaatcagagactt
gatcagtttaattgggtgatgagttgggcttctgctattccaattcatctaatggtagat
atgatggagaagtttttcttcaccaagtggctacaggttttgtatcactggttatgttcg
aacccgaactttgaagaggttttgaattggtataaaggttggaaggaactcattcctgag
gagcttcatgcaaatgaaagtatccggtatcagcttaattgcggtcttgacatgatgaat
cgggctgttgagggtatggaggtggtccaacctggtttgaaagagaatattagctacctt
agggtgcttgagcaaaggcaatttgaggcacaacagaaagcagcagctgcacaagcaaac
ttgggtggcactgctcacatggatggcagtggtaatgagatgagcttgaaagatgttatt
gaagcccatgcgcagcagcatggtctgttatttaggcctaaacctgggcggatgcataat
ggtcaccagatatatggctttggtaatgtaagcataatagtcgactctctaaatcaaaag
gtatatgcccaaacagaggaaagctggtctctggtatcccttgaaaggttgcttgacatg
cacaatagttctcttacaagaagacgctga
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