Prunus avium (sweet cherry): 110765707
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Entry
110765707 CDS
T05161
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110765707
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110765707
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110765707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
HHH_5
Cdd1
IMS_HHH_1
HHH
Motif
Other DBs
NCBI-GeneID:
110765707
NCBI-ProteinID:
XP_021824640
UniProt:
A0A6P5TC76
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MDSYTLKSLEDLPAPFRSSFNFRYFNSLQSECFPVCFHSDANMVVSAPTGSGKTVIFELC
ILRLLSRFLSEDGRLIHTNGTLKTIYIAPSKALVQEKVRDWNQKFGSWGINCLELTGDNE
FYNTRNIQEADIILTTPEKFDAVTRYRAKDGGLSFFSDIALLLIDEVHLLNDPRGAVLEA
IVSRIKMLAHNPELKSSSLAHVRFLAVSATIPNIEDLAEWLKVPVRGVKRFGEEMRPVKL
TTKVFGYTPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAHRLSQTVMA
FGRSNPFIKNREQQERLREASLSCSDKQMQSYIPYGVGYHNGGLSMKDRNLIESLFLKGD
IQILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTIQQMCGRAGRPPFDDTG
MVIIMTRRDTVHLYENLLNGCEMVESQLLSCLTEHLTAEIVQLTVSNIPSAIEWMKCSFL
YVRMKKNPGHYAVRKVISKDHIEKHMQDVCVKKVNELSHHQMIWTDKDGFLLKPLEPGRL
MTKYYLKFDTMKHIMQTPVNCSLEDALHVICRSEEIAWIQLRRNEKKLLNDINADKDGQL
RFHILDDKGKRKKRIQTREEKIFVLANDCLTGDPSVHDLSLTQDMNSICSNGCRIARCMK
EFFIYQKNYKGALNSMLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVKSFGTLA
EADPRRIEIVTGRKYPFGNHLKDSLHLLPPKVEMKVEDTECQRQGKLKLVVTLTRLSQTF
QPTKRHYADMIVGSEEDNLILFHEKIRVEEFSSPYSATILLSNPQQGKLTVKANLIFEEY
IGIDIYQKLIFMKDNLSVNNKRGKKPPSFPPPEEVCIIEDDAIRQSPTKELLNSTKSKRV
NDSMPSFNLLDEESEEDEAAANVHEDEIAAKAEDGECKIITQQTVFDHIREKAKNFPVLA
ASNVVCSPSSEPLVLTRKRAREKQLEPYNEVQVLEELEWNKIPRWAVVNPSSEFKETEQN
QHSLMDERAGLPLEPGDGAFKTSREETIFEHIQTKAKNFPVINKSKVVVSGSLTKTKEQP
SKNHPVLSMDPSGVQKGTNSNEVLRNTALISDLETKEVEKDECGISNASPRGLGNAAHLS
SRKMLSFDISMLKNTRPSADPGSSMESRRRKQQPSPIVPQRQCCTLTTVAKTREVETFLG
FQSVFSFL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggattcatatacacttaagtctttggaagatttgcctgctccttttcgttcatctttt
aattttaggtacttcaattctctgcagagtgaatgctttcctgtttgtttccactcagat
gcaaacatggttgtgtcagcgccaactggaagtggtaaaacagtcatctttgagctttgc
attttgaggctcctttcacgattcctctctgaggatgggaggctcattcatacaaatgga
actctcaaaacaatctatatagccccgtcaaaagctttagtccaggagaaggttcgcgat
tggaatcagaagttcgggtcttgggggataaattgcttggagctcactggagataacgaa
ttttacaacaccaggaatatacaggaagcagatattattttaaccactcctgagaaattt
gatgcagtaacccggtatcgtgcaaaggatggtggactgagctttttcagcgatatagca
cttctacttattgatgaagttcatcttttgaatgatcctcgtggagcggttttggaggca
atagttagtagaataaaaatgcttgctcacaaccctgaactgaaatcaagctctctggct
catgttcgttttctagctgtctctgctaccattccaaatattgaggaccttgcggaatgg
ctcaaggttcctgtccgaggagttaaaaggtttggagaagaaatgaggcctgtaaagttg
actacaaaagtttttggctacactccagcaaaaaatgattttctatttgaaaagcgcctt
caaaactacattttcgatatcctcatgcaatattcgagagggaaatctgctctggttttc
tgttctactagaaaaggtgcacaagaagcagcacatagactctctcagacagtcatggcc
tttggccgttcaaatccattcattaaaaacagagaacagcaagagaggctaagggaagct
tcattatcatgcagtgacaaacaaatgcaatcttatattccttatggtgttggttatcac
aatggtggcctttccatgaaggatcgtaatctcatcgaaagtctttttcttaagggtgat
attcaaattttgtgcacaacgaatactcttgctcatggaatcaacctaccggcacataca
gtagtcataaaatcaacacaacacttcaacaaagaaaaaggtctctacatggaatatgac
agatctacaatacaacagatgtgtgggagggcaggtcggccaccatttgatgatacagga
atggttataatcatgacaagaagagatacggttcacttatatgagaatctcttgaatgga
tgtgagatggtggaatcgcaattgctttcatgtttgacggagcatttaaccgcagagata
gttcaactgactgtctctaatattccaagcgcaattgaatggatgaagtgctctttcttg
tatgtgagaatgaagaagaaccctgggcactatgcagttagaaaagtgatttctaaggac
cacatagaaaaacatatgcaagacgtctgtgtaaagaaagttaatgagttgtcccaccat
cagatgatctggacggataaagatggttttctcttgaaaccgctagaacctgggaggctg
atgacgaaatactacctgaaatttgacacaatgaaacacattatgcagacacccgtaaac
tgcagtttggaagatgctcttcatgttatatgccgttctgaggaaattgcatggatacag
ctcagacgtaatgagaagaagcttctaaatgacataaacgctgataaagatggtcaactt
cgctttcatatccttgatgacaaagggaagcgaaaaaagcgtattcaaaccagagaagaa
aagatatttgttctggctaatgactgcttgactggtgatccttcggttcatgatttatcc
cttacccaggatatgaactccatatgctcaaatggctgtagaattgccaggtgcatgaaa
gaattttttatttaccaaaagaattacaaaggagccctgaactcaatgcttctggcaaag
tcattatatcaaaaactctgggatgacagtccatacctgctgaaacaattacctgggatt
ggaatggtgactgcaaaggcactacattcaatgggagtaaagtcatttgggacactggct
gaggctgatcccaggagaatagagatagtcactggtcgaaagtacccttttggaaaccat
ttaaaagactctctacacttgctacctccaaaagttgagatgaaggttgaggacactgaa
tgccagaggcaagggaaattgaagcttgtggtaacattgactcggctatcacagacattc
caaccaaccaaacgacactatgctgatatgattgttggttcggaagaagataacctgatt
ctctttcatgagaaaataagagtggaagaattctccagcccctatagcgcaacaattctc
ctgtcaaatccccaacaaggaaagctgactgtaaaggcaaatcttatttttgaagaatac
attggcattgatatctaccaaaaacttatatttatgaaggacaatttaagtgtgaataac
aaacggggaaagaaaccaccctcttttcccccacctgaggaagtatgtatcatcgaagat
gatgctatacgtcagtctccaaccaaagagcttctgaactcgaccaaatccaagagggta
aatgattccatgcccagtttcaacctcctggatgaagagtctgaagaagacgaggctgct
gccaatgttcacgaagatgagattgctgccaaggctgaagacggtgaatgcaaaatcatt
acacaacaaacagtatttgaccacatacgtgagaaagcgaagaacttccctgtcttggcg
gcatcaaatgttgtgtgctctccatcctcagagcccttagttttgacaagaaaacgtgct
cgtgagaagcagcttgaaccctataatgaagttcaggttttggaagagttggaatggaat
aaaattccaagatgggcggtggtgaatccatcttcagaatttaaagagacggaacaaaat
caacatagccttatggatgagagagctgggcttcctcttgaacctggagatggcgcattc
aaaacttcaagagaagaaacaatatttgagcacatacaaacaaaagccaagaattttccg
gtgatcaacaaatcgaaggtggtggtgtccgggtccttaaccaaaacaaaagaacaaccc
tctaagaatcatcctgtgttgagcatggatccttctggcgtgcaaaaaggaacaaactca
aatgaagtattgagaaacactgcactcatctcagatttggaaaccaaagaggtggaaaaa
gatgaatgcgggatatcgaatgcttctcctagaggtttaggcaacgctgctcatctatca
tctcgtaaaatgctatcgtttgatatctccatgttgaagaataccaggccatcagcagat
ccaggcagctccatggagagcagaagaaggaaacagcagccgtctccaattgtaccacaa
agacagtgctgcacattgacaacagttgccaaaaccagggaagtagaaacatttcttgga
tttcagagtgtcttttcttttctctga
DBGET
integrated database retrieval system
