Prunus avium (sweet cherry): 110765728
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Entry
110765728 CDS
T05161
Name
(RefSeq) transcription factor SPATULA isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110765728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavi03000
]
110765728
Transcription factors [BR:
pavi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110765728
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
110765728
NCBI-ProteinID:
XP_021824628
UniProt:
A0A6P5TBI3
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All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MGDTYDHYYKNATCSSSPSASVSPAAAAPAAPAQPPSTSDEISLFLQQILLRSSSSLASV
VAHTGKAPQFLFSSSPSIAALPDHLSRPCHSMFLGDGITAVDSSAALLQAGNPNVSSSSF
GASENETDEYDCESEEGLEALVEEAAGKPGCGRSSSKRSRAAEVHNMSEKRRRSRINEKM
KALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGMSLHPMCLPGVLQPVQLSQ
MRMDLGEENRPLHLDMTGTLLMNQESPTQNLFHFSNQCTDANQSYVPDMSNVVNSETSFE
LESSMQAHLGPFQLPNSSKEICREDMLQHQQINVNHSETNPLEFELGATARVSLSSNTQV
SDPKGSSSLGACIKGRNRQEGLLLKAMKQNFHIDSMRTGRRRVANDNIKTERRHI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggggatacttatgatcattattacaaaaatgccacttgttcttcttcaccttctgct
tcagtttctccagctgctgctgctcctgctgctcctgctcagcctccttcgacgtccgac
gaaatctccctttttctgcagcagattttgctccgttcgtctagttctctggcctcggtg
gtggcccacacgggcaaggccccgcagtttttgttttcatcgtctccgtccattgctgct
ctgcctgatcatctcagccgtccgtgccactctatgttcttaggggacgggatcacggcc
gttgattcttccgccgcccttttgcaggcggggaatcccaatgtgtcttcctcttcgttc
ggagcgagtgagaatgagacggacgagtatgattgtgaaagcgaggagggtcttgaagca
ttggtggaagaggcggcagggaagccagggtgtggtcgaagttcttcaaagagaagcaga
gctgcagaagttcataatatgtctgaaaagaggaggaggagtaggattaatgagaaaatg
aaggcattgcaaaatcttatcccaaattctaataagacagataaggcttcaatgcttgat
gaagccattgagtacctcaagcagcttcagctccaagtgcagatgttatcaatgagaaat
ggcatgagtctgcatcctatgtgcctacctggagtgctgcaacctgtccaactctcccag
atgagaatggaccttggtgaagaaaataggcctctgcatttggacatgacaggcacactg
cttatgaaccaggaatctccaacacaaaatttgttccatttctccaaccaatgcaccgat
gcaaaccagtcatatgtaccagacatgtcaaatgtagtcaattcagaaacctcatttgag
ttggaatcgtcaatgcaggctcacttgggaccctttcaactgccaaactcatccaaggaa
atctgtagggaggacatgttgcagcatcaacaaattaatgtaaatcattcggagacgaat
cctttagaatttgaattgggagcaacagctagagtttcactttcctctaacacacaagta
tctgatccgaaaggcagtagttctctgggagcatgtatcaaaggaagaaaccggcaggaa
ggtctacttttaaaggctatgaaacaaaattttcatatagatagcatgcgcacaggaaga
agaagggttgcaaatgataacatcaagactgaaagaaggcacatatga
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