Prunus avium (sweet cherry): 110765749
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Entry
110765749 CDS
T05161
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
pavi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110765749
03015 mRNA surveillance pathway
110765749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110765749
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110765749
mRNA cycle factors
P-body specific factors
110765749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
110765749
NCBI-ProteinID:
XP_021824652
UniProt:
A0A6P5TC29
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MLKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVTFRPGKRSQKNPSYSRAYVD
LKRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYL
EFLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTN
GKTSRRASGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQ
QPSEKSVTLASAAGTRILEEESGVSGADAVKKKILLLKGKEREISHVPANMIQQQSSSAK
NMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQSQTSNSDRDKRPPRSQH
VQLILKDTNGTPDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPLNRLDGSSASDESL
SSAFQPAHSQLDSSEGSHKHHGRRGTTHGVKDLDGSPVAGEGKHSKRGYGSHEKQVWVQK
SSSGS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaggaccagttggatcgaaccaaggtggtgctacggcacttgccgccttcgatt
tcgcaaacttcactggtggaacaaatcgacgttttcttttccggccgctacaactgggtc
actttccgtcccgggaagagaagccaaaagaatccgtcatattctagagcctacgttgat
ttgaagaggccagaggatgttatcgagtttgctgaattctttgatggtcatctgtttgtt
aatgagaagggcagtcaatttaaagttattgttgagtatgctccttcacaacgcgttcca
aaacagtggtctaagaaggatggtcgtgaaggaaccatattcagagatcccgagtatctg
gagtttcttgaatttcttgcaaagcctgctgagaatcttcctagtgcggagatacaattg
gagagaagagaagcagagcgctctggtgctggaaaggatgctcccatagttacaccatta
atggattttgttcgtcagaaaagggcttccaaggctggatctcggaggtcactgactaat
ggtaaaacgagcagaagagctagtggaccatcatctagaagtccaagtttagcgacgagc
aaacgaggttctgagaggaaaagaaattctgccacaatgtatgttttgagggatgctaga
aagaacaccagtgccaaagacaagtcaacttacattctggtacccaagcgtgatgatcag
caaccttctgaaaagtctgtcactttggcatctgcagctggaactcgcattttggaagag
gagagtggagtttctggtgctgatgctgtgaaaaagaaaatcctgcttctgaaagggaaa
gagagggagatatctcatgttccggcgaacatgatacagcagcagagttcatctgctaaa
aacatgggtggtacaattgcactgaaacaaaacctgcgccgtcaagaaaatgggaggatt
ataagaggaatacttctaaacaaggatgcacgtcaaagtcagtcttctgggatttactct
gcgcaacaaagccagacttcaaattcagatagggacaaacgacctcctcggtcccaacac
gtgcaattgattttaaaggatacaaatggcactccagattataatattgttgggaatgac
ttgcatggtatttgtagtgagaagcaggagaaacggataaggaataaggagagacctgat
cgtgttgtatggactcctctaaatcgtttagatggatcatctgcaagtgatgagtctttg
tcatctgcttttcaacctgctcactcacagctagattcttcagaaggctcccataaacat
catggtcgccgaggaacaacacatggtgttaaggatcttgatggctcaccggttgcaggt
gaaggaaaacattcaaaaagaggctatggctcccatgagaaacaagtgtgggttcagaag
tcaagttctggttcttaa
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integrated database retrieval system
