Prunus avium (sweet cherry): 110766038
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Entry
110766038 CDS
T05161
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110766038
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110766038
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110766038
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Atypical E3
110766038
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
110766038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
Zn_Ribbon_TF
SLX1_C
Baculo_IE-1
Zn_ribbon_RRN7
zf-RING_2
DUF7117
PHD_NSD
SidE_DUB
zf-HC5HC2H
TetR_C_4
zf-ANAPC11
Zn_Ribbon_YjdM
PHD
Motif
Other DBs
NCBI-GeneID:
110766038
NCBI-ProteinID:
XP_021824985
UniProt:
A0A6P5TD64
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MTELNWRHQTVIQALLSRGPLKEDQFHRIFTGLTGKTPGSDRQRFDDFLLKINKALSYVQ
FELRGCRFQYDGQVYYGVVNNVSDEESKLGTKYSVAQIAFYKAIIEAIVQDGAAQGTISN
IDALNLRLENQVLMGTMLQSHGGLPHVPPVLKNFSISMKEKTLDELVQDQWLSITPDHYI
GLGVRSFLDLRSWFRSNDVPACEVCNEAGVKAALCQKEGCTARIHEYCLKKLFSERKGER
VCPSCGTQWQYTVTKAEAVEDDEQNYPTQSQPPAGLKKKRPRRNEIGDGDISGSSQASLP
GGPNLRRSTRSSIRLQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacggaactaaactggagacaccagacggtcattcaagctctgctttcacgcggccca
ctcaaggaggaccagttccaccgcatcttcacgggcctcaccggaaaaaccccaggtagt
gaccggcagcgatttgatgattttcttctgaagataaacaaggcactttcttatgttcag
tttgagttgcggggatgcagatttcaatatgatggtcaagtttattatggagttgtcaat
aatgtttctgacgaagaatcgaagctgggaacaaaatattcagttgcccagattgctttc
tataaggctattatagaagcaattgtgcaagatggtgcagctcaaggaaccatatctaac
attgatgctcttaatctacgattagagaatcaggttctaatgggtacaatgttgcaatca
catggaggtctacctcatgtccctcctgtattaaagaatttctcaatatctatgaaggaa
aaaactcttgatgaactcgtacaggaccagtggcttagcattactccagatcattatatt
ggacttggtgtcagatccttcctcgatctacgaagctggtttcgcagtaacgatgttcca
gcatgtgaagtgtgcaatgaagctggggtgaaggcagcgttgtgccaaaaagaaggttgt
acagctcgaatccatgagtactgtcttaagaaattgttctcagaaagaaagggggaaaga
gtttgtccaagttgcggtactcagtggcaatatacggtaaccaaagcagaagctgtagaa
gatgatgaacaaaattaccctactcagagccagccacctgcaggactcaagaaaaagagg
ccaagaagaaatgaaattggtgatggagatatatctggttcctctcaagcttctttacct
ggtggtcctaatctaagaagatcaactcgaagctctatccgtcttcaataa
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