Prunus avium (sweet cherry): 110766228
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Entry
110766228 CDS
T05161
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110766228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pavi03032
]
110766228
Enzymes [BR:
pavi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110766228
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
110766228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
TAF4
Motif
Other DBs
NCBI-GeneID:
110766228
NCBI-ProteinID:
XP_021825211
UniProt:
A0A6P5TDJ2
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MENPIYDTVGDDEYDALVAKRREEVRGFIVDDDGLGYCDEGEEEDWTRAGPSSDESDGGD
RPKRRRAEKKEKDKEKEARPKKPNSSLTAAAAMMGKQRLSSMFTSSVFGKTRDNERGKGL
NCDSIVDDVIAEFAPDEEDREKRRRGHSKKSFVPISCVKSERGSDGGVGLTRRAELDIVV
ANGSDSVLINEGANENESKKDLGFEIDDPTSEQTHNVSENGGVIEEKRVDFVEEKVEAVV
KKEEVFTLNAKIKEDNKDPALSAMAGWKAVKTGGDGDIGSGTVEVNSGSNGEETSDFDLE
EDGSLPFYMLDAYEELYGANIGTLYLFGKVKAGSTYQSCCMVVKNMQRCVYAIPDSSVFH
TDEMMKLEKDAEESRISSTDFRKKLHDVASGLKNDIAKKLLDLNVSNFSMAPVKRKYAFE
RSDIPAGENYVLKINYPFKDPPLPADLKGETFCALLGTHCSALELFLVKRKIKGPSWLSV
SKFSICPAPKRVSWCKFEVIVDSAKDIGVSNCPKKTAESPPVVVTAISLKTIINQKHNVN
EIVSASVICCHKAKIDTPVLTSEWTRPGMLSHFTVIRKLDGGIFPMGFTKEATDKNSKAG
SNVLSIESSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIG
RLKRSVMPKLAKGSTIFGSGASPGIMSCISGRLLCDTYLCSRDLLKEVSYSLTQLAKTQL
NKDRKEIMPHDIPRMFQKSEFLMELIEYGETDAWLSMELMFHLSVLPLTRQLTKISGNLW
GKTLQGARAQRVEYLLLHAFHAKKYIVPDKYPHPKETKLTKRRIDNGSDERNVDELDVND
INIDNDAHSGHGKGKKGPAYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTV
ERSQEGLAPRLPSSKTTGLLPELLKDLVERRRNVKKWMKTASGLKIQQLDIQQQALKLTA
NSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGL
DDIAKAKAIAWKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKNETPYEVIE
RKGLDMVRRDWSLLSKEQGDFCLSQILSGGSCEDVVESIHNSLMKVQEDMRKGQVALEKY
IITKTLTKPPEAYPDAKNQPHVQVAQRLKQSGYSTGCSVGDTVPYIICCEQGTGSVNSTG
IAQRARHPDELKREDGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPERLADCLGLDSSKF
KVNSSEAVRDDPSSLSLAVDDEERYQGCEPLILACPSCSGTFDCPNILNSISKSITGKST
RPQAEESTIDFWHKLRCPKCPGEGDVGRLSPAMIANQVKRQADSFVSMYYKGTMTCDDDT
CKHNTRSLNLRLVGDSERGTVCPDYPRCNGRLVREYTEADLYKQLSFFCHVLDTVRCIEK
MEASTRLPLEMELAKIRPIVDLAASTVQRIRDRCAYGWIQLQDFCVTV
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggagaacccgatctacgacacggtgggtgacgacgagtacgacgcgctcgtcgcgaaa
cgacgcgaagaggttcgaggtttcattgtcgacgacgatggcctggggtattgcgatgag
ggcgaggaagaggattggacccgggctgggccgtcgtcggatgaatctgacggcggcgat
aggccgaagaggaggagagccgagaaaaaggagaaggacaaggagaaggaggctcggccc
aaaaagcccaattcttcgcttacggctgcggcggcgatgatggggaagcagaggctgtct
tctatgtttacatcatcggtgtttgggaaaactagagataatgagaggggcaaagggttg
aactgcgatagtattgtggatgatgtgattgcagagtttgcgcctgacgaggaagacaga
gagaaacggaggagggggcattcgaaaaagagtttcgtgccgatttcttgcgttaagagt
gagagagggtctgatggtggtgttggtttaacaaggagggctgaattggatatagttgtt
gcaaatggtagtgattctgtgctgattaatgaaggggcaaacgaaaatgagagcaagaag
gacttgggttttgaaattgatgatcctacaagtgagcaaactcataatgtttcagaaaat
ggaggggtaattgaggagaaaagggtggattttgttgaggagaaagtggaagccgtggtt
aagaaggaagaggtttttactttgaatgcgaagattaaggaagataataaggacccggca
ttgagcgctatggctggatggaaggcagtgaaaactggaggggatggggatattggtagt
ggtactgtggaggtcaacagtggctcaaatggtgaagagacttcagattttgatctggaa
gaagatgggtcactgcctttttacatgcttgatgcttacgaagagttatatggagctaat
ataggcaccctttatctatttgggaaggtaaaagcaggaagtacataccagagttgttgt
atggttgtaaagaacatgcagagatgtgtctacgcaattccagacagttctgtatttcac
actgatgaaatgatgaagcttgaaaaggatgctgaagagtcaaggatttcatccacagat
ttccgtaagaagctgcacgatgtggcttcaggtttgaaaaatgacatagcaaagaagttg
ttggatctcaatgtatcaaattttagcatggcaccggttaagaggaaatacgcatttgag
cgatctgacatacctgcaggagagaattatgtacttaagatcaattatccattcaaggat
cccccacttccagcagatctaaaaggcgaaactttctgtgctcttctaggaactcattgc
agcgcgttggagcttttccttgttaaaaggaagataaaaggaccttcctggttatcagtt
tcaaagttttctatctgcccagccccaaaacgggtgagttggtgcaagtttgaggtgata
gttgattctgcaaaagacataggggtttcaaattgcccaaagaaaactgcagagagtccc
ccagtggttgttactgcaataagtttaaaaactattatcaaccaaaagcataatgttaat
gaaattgtctctgcatctgttatctgctgtcacaaggccaagattgacactcccgtgttg
acctcagaatggacaagacctggtatgctgagccattttactgttatccgtaagcttgat
ggaggcatatttccaatgggattcactaaagaggctacggataagaactctaaagctgga
tcaaatgttttaagcattgaaagcagtgaaagggctttgctaaaccgtttgatgattgaa
ttatacaagctggatagcgatgttcttgttggacacaatatatctgggtttgacctggat
gtccttctccacagagctcaggtttgcagagtgccaagcagcatgtggtccaaaataggc
cgcctcaagcgttctgtgatgcctaagcttgcaaaaggaagcaccatttttgggtctgga
gcaagtccagggatcatgtcctgcatttctggtcgccttctgtgtgatacatacttgtgt
tcccgtgacttattgaaggaggttagctattctttgacacaacttgcaaagactcagctg
aacaaagaccgaaaggagatcatgccacatgatattcccagaatgtttcaaaaatcagag
tttctcatggaacttattgaatatggagagacagatgcatggctgtctatggaactcatg
tttcatttgagtgttcttcccctcacacgtcagctgactaagataagtggtaacctgtgg
ggaaaaactctacaaggtgctagggcacaaagagtagaatatcttttactgcatgctttc
catgcaaagaagtatatcgttccagacaagtatcctcatccaaaagaaacaaaattgaca
aagcggagaatagataatggttctgatgagagaaatgttgatgagttggatgtaaacgat
ataaatattgataatgatgcacatagtggtcatggaaaaggcaaaaaaggtcctgcctat
gcaggtggattggtcttggagccaaagagaggtttatatgacaagtacatattacttctg
gacttcaatagtctttacccgtctattattcaggaatacaatatatgcttcacaacagtg
gagagatctcaggaaggattggctcctcgtttgccatctagtaagacaactggacttcta
cctgagttgttaaaagatctagttgaacggaggagaaacgtgaagaaatggatgaagact
gcatctggtctcaagattcagcaacttgacattcaacagcaagctctaaagctgactgca
aacagtatgtatggatgcttggggttttcaaactcgagattttatgcaaagccactggca
gagcttataacactgcaagggagggagattctacaaagtaccgttgatcttgttcaaaac
aatttgaacttagaggtaatctatggtgatacagattcaataatgatttacagtggactg
gatgatattgcgaaagcaaaagcaattgcatggaaagtcattcaagaggttaacaaaaag
tacagatgtttagaaattgatcttgatggtttgtacaagagaatgctgcttctcaagaag
aagaaatatgcagctgtaaaggtgcaattcaagaatgagacgccatatgaggttattgaa
cgtaagggcctcgatatggttcgtcgagactggagcttactttcaaaggaacagggagat
ttctgcctaagtcagattttgtcaggagggtcatgtgaggatgttgttgaatcaattcat
aactctctgatgaaggtgcaagaggacatgagaaaaggacaagtcgcccttgagaaatat
atcatcaccaagacattaactaaaccacctgaagcatacccagatgccaaaaaccaacca
catgttcaagtggcccaaagattgaagcaaagtggttattctacgggttgctctgttggc
gatacagtcccctatatcatttgctgtgagcaggggaccggttcagttaattcaactggt
attgctcaacgtgctagacatcctgatgaactaaaacgagaagatgggaaatggatgatt
gacattgattactacttggcccagcagattcatcctgtggtatcacgtctttgtgcttca
attcagggtaccagccctgaacgcttagctgattgtttagggcttgactcttctaagttc
aaagttaattcaagtgaagctgtcagagacgacccttccagcttgtcccttgctgttgac
gatgaagagagatatcagggttgtgagcctttgatcttggcatgtcctagctgctctggt
acttttgattgtccaaatatcttgaattccatttcgaagtcaatcactggaaagtcaaca
aggccacaagctgaggaatctaccatcgatttttggcataaactgcggtgtccaaaatgt
ccaggggaaggtgatgtgggcagactgtctcctgcaatgatagccaaccaggtgaaaagg
caagcagacagttttgtttcaatgtactataagggtacaatgacgtgtgatgatgacact
tgcaagcacaacacacgaagtctcaatcttcggcttgttggtgattctgagagaggaaca
gtttgtccagactatccgcgctgcaatggacgtcttgtaagagagtacacggaagcagat
ctgtacaagcagctctcatttttctgccatgtcttggatacggtacgctgcattgaaaag
atggaggctagcactagattgccactagaaatggagttggccaaaattcggccgattgtg
gatttggctgcctcaacagttcaaaggattcgggaccgttgtgcctacggatggatacag
ctgcaagatttttgtgttacagtttag
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integrated database retrieval system
