Prunus avium (sweet cherry): 110766235
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Entry
110766235 CDS
T05161
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110766235
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pavi00535
]
110766235
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110766235
Meiosis-specific proteins
Cohesin complex and associated proteins
110766235
Proteoglycans [BR:
pavi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110766235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
Myosin_tail_1
ATG14
Cytochrom_C_2
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
110766235
NCBI-ProteinID:
XP_021825217
UniProt:
A0A6P5TDP1
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MYIKQVIIEGFKSYREQVATEAFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNADNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRRQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELQDARQKLA
EVEDARNKVSETSTKMYNSVLDAHEKSKDLDKIMKDLTKELQALSKEKEAIEKQRTEAIK
KHTELELDVKDLQEKISGNFGAKGDAVRQLQTLQKEIQDSMDELEKMNPLYEDQVMKEKE
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNLAQEQKLQDEI
KRLNAELSERDAYIEARRREIATIESLISQSHAGFNHHKSQRDKLQDERKSLWRNETELS
AEIEKLRTEVEKAEKSLDHATPGDVRRGLNSVRKICREYKIPGVFGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSLKGGRVTFIPLNRVKAPRVIYPQNSDVVPL
LKKLKFAPNYNPAFAQVFARTVVCRDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMCTIIQNTKSINIKEEELEKVRFMLQEIDQKITDLVTEQQKIDAKRAHDKS
ELEQLKQDIANADKQKILISKALGNKEKSLADVRSQIDQLRASMAMKRAEMGTDLIDHLT
PVEKDLLSRLNPEIADLKEKLISCKTDRIETESRKAELETNLTTNLKRRKQELEAIISTM
ETDNLHGEAEIKSQELNDSRLLVEDLTEQLRRVSESIDGQSKQLKRIKDEKTKLKNLEDN
YERTLQDEAKELEQLLSKRNMFLAKQEEYSKKIRELGPLSSDAFETYKRRSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIGELIQVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGHHGDDDQDEDGPREADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVSDKIYGVEHKNRVSRVNVVSKEDALDFIEHDQS
HNAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcaggttataattgaaggatttaagagctacagagaacaagttgctact
gaggccttcagcccaaaagttaattgtgttgttggtgccaatgggtcgggaaagacgaat
ttcttccatgcaattcggtttgtactaagtgaccttttccaaaaccttaggagcgaggat
aggcatgctctactccatgaaggggcaggtcaccaagtattatctgcgtttgtggagatt
gtctttgataatgctgacaatcgaatcccggttgataaggaggaagtgcgtttgcgaaga
accattggtttgaagaaggatgagtatttcttggatggaaaacacatcacgaaaaccgag
gttatgaatttgctggaaagtgctgggttctctcgctccaatccttattatgttgtgcag
caaggaaagatagcatcattgacactgatgaaagactctgaacggctggatttactgaag
gaaattggtggcactcgggtgtatgaggagagacgtcgagaaagtttgaaaattatgcag
gaaacaggaaacaaaagaaggcagataattcaagttgttcagtacttggacgagagatta
aaggaattggatgaagagaaagaggaactgagaaagtatcagcaacttgacaagcagcga
aaatctttggaatacactatttatgacaaggaacttcaggatgctcgccaaaaactggca
gaggtagaagatgctcgaaacaaggtttctgaaacgtcaacgaagatgtataatagcgtg
ctggatgcccatgaaaagtccaaggacttggacaagattatgaaggatctgactaaagag
cttcaagctttatctaaagagaaagaagcaatagaaaaacaaagaacagaagcaataaag
aagcatacagagcttgagcttgatgtgaaagatttgcaggagaagatatctggaaacttc
ggagccaaaggagatgctgtgagacagttgcagactctgcagaaagaaattcaggattca
atggatgaacttgagaaaatgaatcctctgtatgaggatcaagtcatgaaggaaaaggag
atcacaaaaggaataatggaacgcgagaagcagcttagcatactttatcaaaaacaaggt
cgtgcaacccagttttcaagtaaagctgctcgtgacaaatggctccaaaaggaaattgat
gatctcgagcgagttctttcttcaaatttggcccaggagcaaaaacttcaggacgaaatt
aaacggcttaatgctgagttgagcgagcgggatgcctacattgaggcccgaagaagagag
attgctactattgaatctctcatctctcagtcacatgcagggttcaatcatcataagtca
cagagggacaagttgcaggatgagcgcaagtccctgtggaggaatgaaactgaactttct
gctgaaattgagaagctgagaacagaagttgagaaggctgaaaagagcctggatcatgcg
actcctggtgatgtcaggagagggctaaattctgttcgtaagatttgcagagagtataaa
attcctggggtatttggtccaattattgagttgcttgattgcgatgaaaagttttttact
gctgttgaagtaactgctgggaacagcttgtttcacgttgtggttgaaaatgatgaaata
tcaacacagataattaggcaccttaattcattgaagggtggacgagttacgtttatcccc
ctaaatagggtgaaggctccacgggtaatttatccacagaattcagatgtggttcctctg
ttaaagaagttaaagtttgctccaaactataacccagcatttgcccaggtatttgcaaga
acagttgtttgtcgagatctggatgtggctaccagggttgctcgtaccgatggtctagac
tgcattactttggaaggtgatcaagtcagcaagaagggtggtatgacaggagggttttat
gaccatagacgttcaaaattgaagtttatgtgtacaatcatacagaacacaaaatctatc
aacataaaggaagaagaactggagaaagttagatttatgcttcaagagatagaccagaaa
attacagatctcgtaactgaacagcagaaaattgatgctaagcgggcccacgacaaatca
gaactagaacagcttaagcaggacattgccaatgctgataagcagaaaattttgatttct
aaagctcttgggaataaggaaaaatcacttgctgatgtgcggagtcaaattgatcagctt
agagccagtatggccatgaagagggctgaaatgggcacagatctcattgatcatttaact
ccagtggagaaggatcttctctcaagattaaaccctgaaatagcagatctaaaagagaag
cttatttcatgcaagacagatcgtattgagaccgagtcaagaaaggcagagcttgagact
aatttaaccacaaacctcaagaggcgtaagcaagaactagaggccataatctccaccatg
gagactgacaatttgcatggtgaagctgaaattaagagtcaggaactgaatgattctaga
ttgttggttgaagatttaacagagcagctcagaagagtttccgaaagcatagatggccag
tcaaagcaactcaagagaattaaagatgaaaagactaagttaaagaatttggaagacaac
tatgagaggactcttcaggatgaagccaaagagctggagcaacttttgagtaaaagaaat
atgtttcttgctaaacaagaggaatactcaaagaaaatcagggagttgggcccattgtct
tcagatgcttttgaaacgtataagcgaaggagtatcaaagaattgcataaaatgctgcac
agatgcaatgagcagctgcaacaatttagtcatgtcaacaagaaagcacttgatcagtat
gtgaattttacagaacaacgagaagaactccagaaaaggcaagccgagctggatgcgggt
gatgagaaaattggagaacttatacaggttttggatcaaaggaaggatgaatcaatagaa
cgtacttttaaaggtgttgctaggcactttcgagaagttttctcagaacttgtgcaaggt
ggccatggttaccttgttatgatgaagaaaaaggatggtcaccatggtgatgatgatcag
gatgaggatggaccacgtgaagcggatttagagggaagagttgagaaatatattggtgta
aaagtgaaggtttcttttaccggacaaggggaaactcagtcgatgaagcagttgtctggg
ggtcagaaaactgttgttgcgctaacgcttatctttgccatccagcgatgtgatcctgct
cccttttatctttttgatgaaatagatgcagcactggatcctcaataccgaacagctgtt
gggaatatgatccggcgcctggcagacatggcaaatactcaatttataaccacaacattc
cggccagagcttgtgaaagtttctgacaaaatatatggtgttgaacataaaaacagggtg
agccgtgtcaacgttgtctcgaaggaagatgcattggacttcatcgagcatgaccagtct
cacaatgcagagtaa
DBGET
integrated database retrieval system
