Prunus avium (sweet cherry): 110766397
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Entry
110766397 CDS
T05161
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110766397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110766397
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
110766397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
110766397
NCBI-ProteinID:
XP_021825417
UniProt:
A0A6P5TE81
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MARNKDAMVLLIDVSPSMHKALPVIEKVCSMLAEKKLIYSKYDEVAVILFGTEETENELT
KEVGGYEHVVVLQNIKVVDGQLVETLQQLPRGTRDGDFLDAIIVGMDMLIKKYGETYKGK
KRLCLLTNAQFPIKYPLEGTKEDQVSTIAEHMNTHGMRMESIVVRGSLTGEANKSVMDEN
DNLLGIFSRKTCAKLVHVESPTSLLGALRTRKISPVTIFRGDLELSPKMKIKVWVYKKTS
EEKFPTLKKYSDKAPPTDKFATHEVKVDFEYKSVEDPSKVVPPDQRIKGYRYGPQVIPIS
SAEWDAVKFKPEKSVKLLGFSDAKNIMRHYYMKDVNVFIPEPGNTRAILAVSALARAMQD
MNKVAILRCVWRQGQGNVVVGVLTPNVSDNDNIPDSFYFNVLPFAEDVREFQFPSFDNFP
ASWQPNEQQQEAADDFVRMFDLAPPGKEEALPPGLTPNPVLERFYRHLELKSRHPDAAVP
PLDETLRMITEPDKELLSQNRSVLDVFHSRFEVKENPRLKKSSRRFLRDKPSGSNEGHAD
ISDEPNSSEYTSAVKVEKVGDATPVQDFEAMINRRDSPRWVGKAIKDMKNKIHDLVEDSY
EGDNYPKALECLIALRKGCILEQEPKQFNDFLHTLCIFCEEKALSSFCEFLASKELTLIS
KTEAIDSEVTDDEARNFLVKSEPKME
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacaaggatgccatggttttgttgatcgatgtcagtccatcaatgcacaaa
gctcttccagtgatagaaaaagtttgctctatgctagcagagaagaagctgatttacagc
aaatatgatgaagtagcagttattttgtttggaacagaagaaactgaaaatgaactaaca
aaggaagtgggtggttatgagcatgttgtggttttacaaaatatcaaagtagttgatggg
cagcttgttgaaactctacaacaactcccacgaggaactcgtgatggtgattttcttgat
gctataattgttgggatggatatgctgataaagaaatatggagaaacatacaaaggaaag
aaacgtctttgtctgcttactaatgcacaattccctattaaatatccactagaaggaact
aaagaagatcaagtcagcaccattgctgaacacatgaatacacatggtatgagaatggaa
agtatagttgtaagaggaagtcttactggggaagcaaataaaagcgtaatggatgagaat
gataatctattgggtatattttcaaggaagacatgtgcgaagttagtgcatgttgagagt
ccgacttcattgctaggtgctcttagaactcgaaaaatatctccagttacaatattcagg
ggtgatcttgagcttagccccaaaatgaagattaaggtatgggtttacaagaaaacatcg
gaagagaagtttcccactctgaagaaatattctgataaagcgcctccaactgataaattt
gccacacatgaagtcaaagtggactttgagtacaaaagtgttgaagatcctagtaaagtt
gtacctccagatcagaggattaaaggttatcgttatggccctcaagttattcccatatca
tctgctgaatgggatgctgtcaagttcaaaccagaaaaaagtgtgaagcttctgggattt
tctgatgctaaaaacataatgcgacactattacatgaaagatgtcaatgttttcatccct
gaaccgggtaatacaagagccattcttgctgtttctgccctagcaagagctatgcaagat
atgaataaggtggcaattttgcgttgtgtttggagacaaggacaagggaatgttgttgtt
ggggtcttgacacctaatgtctctgacaatgataatattcctgattcattttacttcaat
gtgctcccttttgctgaggatgttcgagaatttcaattcccttcttttgataactttcca
gcatcatggcaaccaaatgaacaacagcaagaggctgcagatgactttgtcaggatgttt
gatcttgcaccacctggcaaagaagaggctctgccacctggcctaactccaaatcctgtt
cttgagcgcttttatcgtcatcttgagttgaaatcaaggcacccagatgcagctgtgcct
ccactcgatgaaactctcaggatgattactgaacctgataaagagttgctttctcaaaac
agatctgttcttgatgtatttcacagccgttttgaagtcaaagagaatccaaggctgaag
aaatcaagtaggcgatttttacgagacaagccatctgggtcaaatgagggtcatgctgac
atttctgatgaacctaactccagcgaatatacttctgctgttaaggttgagaaagttggg
gatgctactcctgtccaggattttgaagctatgatcaatcgtagagatagcccacggtgg
gttggcaaagcaattaaggatatgaaaaacaaaatacacgacttagtagaggactcttat
gaaggggataattatcccaaggcactggaatgcttaattgccctccgcaagggttgcatc
ctagagcaagaaccgaaacagttcaatgattttctgcacactctatgtattttctgcgag
gagaaagccctcagcagtttctgtgaatttcttgcatccaaagagctcaccttgatttca
aagacagaagctatagacagtgaagttacggatgatgaagctaggaattttctggtcaaa
tcagagccaaagatggaatga
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