Prunus avium (sweet cherry): 110766531
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Entry
110766531 CDS
T05161
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pavi03016
]
110766531
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
110766531
Transfer RNA biogenesis [BR:
pavi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
110766531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
PTPS
PepSY_2
Motif
Other DBs
NCBI-GeneID:
110766531
NCBI-ProteinID:
XP_021825559
UniProt:
A0A6P5TEH1
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MAVRAVSGCSIFRSASTSSSSPTLFAFRCCPCHFSRRFSQFSIRFPIFRSDKLVPGHGGL
QSSSVHSLVDSVMEELGALRRRRRVRSAAKVELTSSGGIAEDKLVNRTLQQGLLLEFKKD
SERVLLAVAQRPDGKKNWMVSDQNGVTSSIKPQQITYIVPGVENFDHAEISKFVQRAQEN
SDSALLEFAWVELLEKNKRVTAEELAEMIFGSVEPLECYCAHVMLSEDEVYFTVLETKGS
RSIYGPRPAVQVEELLRRKLAKEAAEKELQEFVQLLKSAKAMPLDAKPPKSSWMVEEKIR
QKIKSLESYAIDACTNDDQRKTAGMILRAMGMVKTASSALNLLINIGYFPVHVNLDLLKF
NIRTDHSDEVISAAESLLSDSYDPDEIERKDLTHLKVYAIDVDEADELDDALSATRLQDG
RIKIWIHVADATRFVQPGSIVDREAMRRGTSVFLPTATYPMFPEKLAMEGMSLQQGENCN
AVTVSVVLHSDGSIAEYSVDNSIIRPTYMLTYESASELLHLNLEEETELKILSEAATLRS
IWRRQQGAIDTATLEARIKVVNPEDPEPIINLYVENQADPAMRLVTEMMILCGEVVATFG
SSNNIPLPYRGQPQSNIDTSAFSHLPEGPVRSSALVKLMRAAEIDFRKPIRHGILGLPGY
VQFTSPIRRYMDLLAHYQVKAFLIGKSPPFSAGQLEGMASIVNMNARVAKRLFSSSLRYW
ILEFLRRQSKEKRYRALILRFIKDRIAAILLVEVGLQSSVWVSVGANVGDEVLVRVEEAH
PRDDVLFLKEIVIER
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgagccgtcagcggctgctcaatctttcgctccgcttccacttcctcttcg
tcccctactctcttcgccttccgctgctgcccatgccacttcagtcgccgcttctcccaa
tttagcattcgcttcccaatatttcgatccgataagttagttcctggccatggcggcctt
caaagcagctccgttcacagcctcgtcgacagcgtcatggaagagctcggtgccttgcgc
cgacggagacgagttcgctctgccgccaaggtggagttgacaagcagtggggggattgca
gaagataagcttgtgaaccgaacgctacagcaagggttgctgctcgagttcaagaaggat
tcagagagagtattgcttgctgttgcccagagacccgatggcaagaagaattggatggtt
tctgatcagaatggtgttacatcatccattaaaccacaacaaatcacatatattgttcct
ggtgttgaaaatttcgaccacgcagagatttcaaagtttgttcagagagctcaggaaaac
tcggactcagcacttctagaatttgcttgggttgaactcctcgaaaagaataagcgtgtg
acggcagaagaattagctgagatgatctttggtagtgtggagcctcttgaatgctactgt
gctcatgtgatgctttcagaagatgaagtatacttcactgtgctagagacaaaaggttct
cgctctatatatggacctcgacctgctgtgcaggttgaggaacttctccgtaggaagctc
gcaaaggaggctgctgagaaagaactgcaggagtttgtacaattactgaaatctgctaag
gcaatgcctttagatgctaaacctcccaaatcttcttggatggttgaagagaaaatcaga
cagaaaattaagtctcttgaatcttatgctattgatgcatgcacaaatgatgaccaaagg
aaaacggctggaatgatcctaagggcaatggggatggtgaaaacagcatcatcagctcta
aatctcctcataaatattgggtattttcctgtacatgtgaatcttgacctgttgaagttc
aatatccgtactgatcactcagatgaagttatatcagctgcagaaagtcttctgtcagat
tcatatgatccagatgagattgaaaggaaagatctcactcacttgaaggtctatgctatt
gatgtggacgaggctgatgagcttgatgatgctctgagtgcaacgaggctgcaagatgga
cgcattaaaatatggattcatgttgcagatgcaactaggtttgttcaacccgggagcata
gtagacagggaagcaatgagaagaggaacttctgttttcttgcccactgccacttatcct
atgttcccagagaaacttgccatggagggaatgagtttgcaacaaggagagaattgcaat
gcggttacagtatctgttgtgctgcattctgatggcagtattgcagaatattcggtggac
aactcaatcattagaccaacttacatgttgacgtatgagagtgcatcggagcttcttcat
ttaaacctggaagaagagactgaactgaaaatcctgtctgaggctgcaactcttcgttca
atatggcgtcgccaacagggtgcaattgacacagccacattggaagcacgtatcaaagtg
gttaatccagaggatccagagcctattattaatctgtatgttgaaaaccaggcagaccct
gcaatgcgacttgtcactgagatgatgatactctgtggagaagttgtggccacatttggt
tctagcaataacattcctttaccctacagaggacagccccaatccaacatcgacacatct
gcattttcacatcttccagaaggacctgttagaagctctgctcttgttaaactaatgcgt
gctgctgaaattgatttcaggaaacctatacgccatggaattttaggacttccgggttat
gttcagtttacatctcccatccgtagatatatggatttactagctcactatcaggttaaa
gcatttctcatcgggaaatctcctcctttctcagctggtcagttggaggggatggcatct
atagtgaatatgaatgctagagtagcaaagaggctctttagcagcagtcttcggtattgg
atattagaatttctgagaaggcagtcaaaagaaaaaagatatcgtgcattgattcttaga
ttcattaaggatcggatcgcagccatattgttagttgaggtgggacttcaatcttccgtg
tgggtatctgtgggagcaaatgttggagatgaagttctagttcgggtagaagaagctcat
ccacgtgatgatgtgcttttccttaaagagattgtcattgagagataa
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