Prunus avium (sweet cherry): 110766771
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Entry
110766771 CDS
T05161
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pavi01009
]
110766771
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110766771
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110766771
Protein phosphatases and associated proteins [BR:
pavi01009
]
HAD phosphatases
Fcp/Scp phosphatases
110766771
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110766771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
110766771
NCBI-ProteinID:
XP_021825828
UniProt:
A0A6P5TES4
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MYKSVVYKDEELLGEVEIYPEENENKNKNKNLVDELKEIRISYFSQSSERCPPVAVLHTI
SSHGVCFKMESKTSQSQDTPLFLLHSSCVMENKTAVMPLGGEELHLVAMHSRNGDKRYPY
FWGFSVAPGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKISSEVDPQ
RISGMLAEIKRYQDDKFILKQYAENDQVVENGRVIKTQSEAVPALSDNHQPIIRPLIRLH
EKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRL
LDPDSNLINSNKLLDRIVCVKSGSRKSLFNVFQESLCHPKMALVIDDRLKVWDDRDQPRV
HVVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFREFDDSLLQKIPEVFYEDDIKD
VPSPDVSNYLVSEDDSSALNGNRDPLPFDGITDVEVERRMKEATSAASMVSSVVTSIDPR
LPPLQYTVAPSSSTLSLPTTQPSVMSFPSIQFPQAASLVKPLGHVGSAEPSLQSSPAREE
GEVPESELDPDTRRRLLILQHGQDTRDQPPSEPPFPVRPPMQASVPRAQSRPGWFPVEEE
MSPRQLSRMVPKDLPLDPEPVQIEKHRPHHSSFFPKVENSIPSDRILQENQRLPKEAFHR
DDRLRFNHALSGYHSLSGEEIPLSRSSSSNRDVDFESGRAISNAETPAAVLQEIAMKCGA
KVEFRPALVASTELQFYVEAWFAGEKIGEGSGKSRREAHYQAAEGSLKNLANIYLSRVKP
DSVSVHGDMNKFPNVNSNGFAGNLNSFGIQPFPKEESLSSSTSSEPSRPLDPRLEGSKKS
MSSVSTLKELCMMEGLGVVFQPRPPPSTNSVEKDEVHVQVEIDGEVLGKGIGLTWDEAKM
QAAEKALGSLTSTLYAQKRQGSPGSLQGMSSKRMKQEFPQVLQRMPSSARYPKNAPPVP
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtcggtggtgtataaagatgaagagttacttggggaggtagaaatataccca
gaagagaacgagaacaagaacaagaacaagaatttggttgatgagttgaaggaaatcaga
ataagctatttttcgcaatcaagtgagagatgtccaccagtggcagtgcttcataccata
agctctcatggtgtttgcttcaaaatggagtcaaagacctcgcagtctcaggacacgccg
ctctttcttttgcactcctcgtgtgtcatggagaacaagactgcagtaatgccgctagga
ggggaggagctccatttggttgccatgcactccaggaatggtgataaacggtatccatat
ttctggggattcagtgttgcaccaggactctacaattcttgccttgtcatgctgaacctt
agatgtcttggcattgtgtttgatcttgatgaaacactcattgttgcaaatacaatgcgc
tcatttgaggatcgaattgaggccctacagaggaagataagcagtgaggtggacccacaa
cgcatttctggcatgcttgcagagatcaagcggtatcaagatgacaagtttatattgaag
caatatgctgaaaatgatcaagttgttgaaaacgggagggtgatcaaaactcaatctgag
gctgttccagccttgtctgataatcatcaacctattattcggccacttatacggttacat
gagaaaaacattatactgactcgcattaatccacagattcgtgatacaagtgttctcgtg
aggttgagacctgcatgggaggatcttcggagttacttgactgcaagagggcgcaagcgc
tttgaggtttatgtttgcacaatggctgaaagggattatgctttagaaatgtggaggctt
ctggatcctgattcaaatctgataaactcgaacaaattattggatcgcattgtgtgtgtc
aagtctggttcaaggaagtcgttgttcaatgtcttccaagaaagcttatgccatcctaag
atggcattggtaattgatgatcgcttgaaagtgtgggatgacagagatcaacctcgggtg
catgttgttcctgcatttgcgccatactatgctcctcaagctgaggcaaataatgccgtt
cctgtcctgtgtgttgcaagaaacgttgcctgcaacgtcagaggtggattttttagagaa
tttgatgacagtcttctacaaaagattcctgaagttttctatgaagacgatattaaagat
gttccttctcctgatgtgagcaattatctagtttcagaggatgattcttctgctttaaat
ggaaacagggaccctcttccttttgatggcataacagatgttgaggttgaaagaagaatg
aaggaagcaacctcagctgcttcaatggtatcttcagtagtcactagcatagatccaagg
cttcctcctcttcagtacacagtggctccttcttctagcacactttcactgccaacaact
cagccatcagtgatgtcttttcctagtatacagttccctcaggcagcttcactagttaaa
cctttgggtcatgttggctctgcagaaccaagcttgcaaagttctcctgctagagaggag
ggtgaggtacctgaatcggaattagaccctgatacaaggcggaggctgctgattttgcag
catggccaagatacaagagatcaaccaccaagtgagcctccatttcctgtaagacctcca
atgcaagcctctgttccacgagcgcaatcgcgtccaggctggtttccagtggaggaagag
atgagcccacggcaactgagccggatggtacccaaagatcttcctttagatccagaacca
gtgcagattgagaagcatcgacctcatcactcgtcttttttccctaaggttgagaattcg
attccatctgatagaattctccaagaaaaccagagattgccaaaagaggcatttcataga
gatgatcggttgagattcaaccatgcattgtctggttatcattcattgtcaggtgaggag
attcccttaagtcgatcctcttccagcaacagagatgttgactttgaatctggacgagct
atatcaaatgcagaaactcctgctgcagttttacaggaaattgcaatgaagtgtggagcc
aaggtggagtttaggccagctttggttgctagtacggaactgcagttttatgttgaggct
tggtttgctggagagaaaattggtgaaggaagtggtaaatcgagaagggaagctcattac
caggctgctgagggttctctaaaaaatttagccaatatatacctttcccgtgtcaagcct
gattctgtgtccgttcatggggatatgaacaagtttcctaatgttaacagtaatggtttt
gcgggtaatttgaattcttttgggatccagccatttcccaaagaggagtccctgtcatct
tcaacttcatcagagccttcgaggccactagatcctaggctggaaggctctaaaaagtca
atgagttcagtgtctacactcaaagaactttgtatgatggagggccttggtgtagttttc
caaccacgacctccaccttcaactaattcagtcgagaaagatgaagttcatgtacaggtt
gaaatagatggagaggttttggggaagggaattggattgacgtgggatgaggctaagatg
caggctgctgaaaaggcgctcggaagtctaacatcaacgctatatgctcagaaacgtcag
ggttctccagggtctttgcaagggatgtccagtaaacgtatgaagcaagagtttccacaa
gttttgcaacgaatgccctcttctgctagatatccgaaaaatgctccaccagttccctga
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