Prunus avium (sweet cherry): 110766796
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Entry
110766796 CDS
T05161
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110766796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110766796
03036 Chromosome and associated proteins [BR:
pavi03036
]
110766796
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110766796
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110766796
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
110766796
Noncanonical PRC1 (PRC1.1)
110766796
Noncanonical PRC1 (PRC1.3/1.5)
110766796
Noncanonical PRC1 (PRC1.6)
110766796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-UDP
zf-RING_6
zf-rbx1
DUF7044
zf-Nse
ZNF512_C2HC
zf-C3HC4_5
zf-RING_10
DUF4695
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
110766796
NCBI-ProteinID:
XP_021825868
UniProt:
A0A6P5TEV4
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MPAQKRTPEPMEDDPLQNHHENSHDHPQDEEESDRSLSPSNEEKDEYIIVKLAEIRKEVQ
CPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI
AAIYPDIDKYEEEELAFHEEEKARNKQIQASIAQTFRRQSEALGRKRTTAKATAAAFMRR
SQGSYRNAHLRGRRNYRNVAEHQGSDDNEDANGNDGGKDSTSGDERTEPRPKRCKRWGGG
RSGSANADGGDENDYELNREIMGASAGLVGSSERLAWGKGGMRSHTRYGSTSGGNGKNAR
NIRLSKLVEYLRNSENHDDELDIHLLLVSFDEQRIPSLQRPYLCCRPTLSVGQLCHYVAL
RTALQADEVELYLVKELHAKFSHSTATNVLISKSVVLDSTKDNLQLLREQETLADLRTHN
LIPGHLLLAYQKKWNSS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacagaagcgcaccccagagcccatggaagatgatcctctgcagaaccaccat
gaaaacagccacgaccatccacaagacgaagaggagtccgatcgaagcctttccccgagt
aacgaagagaaagacgaatatatcatagtgaaattggcagaaattcggaaagaggtccaa
tgccctatctgtttagggatcattcggaaaacaagaacagtgatggaatgcctgcatcgc
ttctgcagggaatgcatcgacaagtccatgcgcctggggaacaatgaatgccctgcatgc
cgcacccattgtgctagtcgtcgctctttgagagatgacccaaactacgatgccttaatt
gcagccatctatccagatattgacaagtatgaggaagaggaactggcttttcatgaagag
gagaaggctcgcaataagcagatccaagcttccattgcccagacatttcgacgtcaatct
gaggcactaggaaggaaacgaacaacagctaaagcaactgcagctgcatttatgaggaga
tcacagggtagctatcgaaatgctcatttgagggggagaagaaactatagaaatgttgct
gaacatcaaggttccgatgataacgaggatgcaaatggtaatgatggaggtaaagactca
acttctggtgacgagcgcacagaaccaagaccaaagagatgcaaaagatggggaggaggt
cgatcaggatctgctaatgcagatggtggtgatgaaaatgattatgaattgaacagagaa
attatgggtgcatctgcggggcttgttggcagctcagaaaggcttgcctggggtaaaggt
ggcatgcggagccatacacggtatggcagtacaagtggtggcaatggcaaaaatgccagg
aacatccgcctctctaagttggtggagtatcttcggaactcagaaaaccacgatgatgag
ttggacatccacctcctcctcgtttcttttgatgagcaaagaatacccagtttgcagcgg
ccatatctttgctgcaggcctaccctgtcagttggacaactatgtcactatgtagctctc
cgaactgcactgcaagctgatgaagttgaattgtacttggtgaaagagctgcacgccaaa
ttcagtcattcaactgccacaaatgtcctaatttccaagtctgttgttttagactcaacc
aaagataacctgcaactattaagagaacaagaaacgttggcagaccttagaacacacaat
ctcattcctggtcatctgcttttggcatatcagaagaaatggaactcaagctga
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