Prunus avium (sweet cherry): 110767094
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Entry
110767094 CDS
T05161
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110767094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110767094
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110767094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110767094
NCBI-ProteinID:
XP_021826221
UniProt:
A0A6P5TGH3
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MEMEIEAEVQVRMEPPKIHRLDDSVVNRIAAGEVIQRPASAVKELVENSLDARSSSINIV
VKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTFEDLQSIKSMGFRGEALASMTYV
AHVTVTTITKGQLHGYRVSYKDGVMEHEPKACAAVKGTQIMVENLFYNMTARRKTLQNSA
DDYSKIVDVLSRFAIHHMNVSFSCRKHGAARADVNSVATISRIDAIRSVYGVSVARCLMK
VEAVDKDPSSSVFQMEGFISNSNYVAKKITMVLFINDRLVDCTALKRALEIVYAATLPKA
SKPFIYMAIILPPEHVDVNVHPTKREVSLLNQEIIIEKIQSVVESRLRSSNETQTFQEQA
VEPTPSCQMVSSKDSNRNPSPSAGSKLQKVPVHKMVRTDSLDPAGRLHVYLQPESCGHLE
RNTSLTAIRSSVRQRRNPPKETADLTSLQELIDEVDRNCHSGLLDIVRHCTYIGMADDVF
ALLQHDTHLYLANVVNLSKELMYQQVLSRFAHFNAIQISEPAPVKELIMMALKEGNLDPE
CSGNVELNEKIAGMNTELLKQKADMIEEYFCIHIDKDGNLSRLPVILDQYTPDMDRVPEF
VLCLGNDVDWEEEKKCLQVISAALGNFYAMHPPMLPNPSGDGLQFYQKRKPFRNPEESLS
CTTGDDVVTENEIEHELVAEAETAWAQREWSIQHVLFPSMRLFLKPPNSMATNGTFVRVA
SLEKLYRIFERC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaattgaagcagaagtgcaagtccggatggagcctcccaaaattcaccgc
ctagacgattcagtagtgaaccgaatcgccgccggcgaggtcatccaacgccctgcctcc
gccgtcaaagagctcgttgagaacagcctcgacgcccggtcctcctccataaacatcgtc
gtcaaggacggcggcctcaagctcatccaagtctccgatgacggccacggcatccgctat
gaggacttgcccatactctgtgagcggcacacgacgtcgaaattgtcgacgtttgaggac
ttgcaatcgattaagtcgatggggtttagaggagaagcacttgcgagcatgacttatgta
gctcatgttactgtgacaacgattaccaagggccagttgcatggttatagggtatcttat
aaagatggagtcatggagcacgaaccaaaggcgtgtgctgctgtaaaaggaactcagata
atggttgaaaatttattctataacatgactgctcggaggaagacactgcaaaattctgct
gatgattattcaaagattgtagatgtgttaagccggtttgccattcatcatatgaatgtt
agcttctcctgcagaaaacatggagctgctagagcagatgttaattctgttgccacaata
tcaaggattgatgcaattcgttcagtttatggggtgtcagttgctcgctgtctgatgaag
gtagaagctgtggataaagatccttctagctcagttttccagatggaggggtttatctcc
aattccaattatgtagcaaagaagataaccatggttctttttataaatgacagattggtg
gattgtactgcattgaagagagctctagaaattgtttatgctgcaacattgccaaaagca
tcaaaacccttcatatacatggcaattatattaccacctgaacatgttgatgtcaatgtt
cacccgacgaagagagaggtaagccttctgaatcaggaaatcatcattgaaaagatacag
tcggtggttgaatcaaggttgagaagctccaatgagacacaaacatttcaggaacaggca
gtcgaaccaactccatcctgccagatggtttcaagcaaagattcaaataggaatccctca
ccatctgcagggtcaaaattacaaaaggtaccagtgcataaaatggttagaacagattca
ttggatcctgctggaaggttgcatgtttacttgcaaccagaatcttgtggccatcttgaa
aggaatactagcttgactgctattagatcttctgttagacaaagaagaaatccgccgaag
gaaactgctgatctgaccagccttcaggagcttatagatgaagttgatcgcaattgtcat
tctggtcttctggacattgtgagacactgcacctatattggaatggcagatgacgtcttt
gcgttgcttcagcatgatactcatctttaccttgcaaatgtagtgaacttgagcaaagag
ctcatgtaccagcaagttcttagtcgatttgcccattttaatgctatacaaataagtgag
ccagccccagtgaaggagttgatcatgatggcactaaaagagggcaatttagatccagaa
tgcagtgggaatgttgagctgaatgagaagattgcagggatgaatacggaactactcaag
caaaaggctgatatgatagaggagtacttttgcattcatatagataaagatggaaatttg
tctaggcttccagttatacttgatcaatacacacctgacatggatcgtgtccctgaattt
gtgctttgtttgggcaatgacgttgactgggaggaggaaaaaaaatgccttcaagtaatt
tcagctgcacttggaaacttctatgccatgcatcctcctatgttgcccaacccatctggt
gatggcttgcaattttaccaaaagagaaaacctttcagaaatcctgaagaaagtctttct
tgcactactggagatgatgtcgtgacagaaaatgaaatcgagcatgagctagttgcagag
gcagagactgcatgggcccagcgcgagtggtctatccagcatgttttgtttccatcaatg
aggctctttctcaagccaccaaattctatggctacaaatggaacatttgtccgggtagct
tcactcgagaaactgtacaggatttttgaaagatgctaa
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