Prunus avium (sweet cherry): 110767178
Help
Entry
110767178 CDS
T05161
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110767178
Transcription machinery [BR:
pavi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110767178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Response_reg_2
GerE
Motif
Other DBs
NCBI-GeneID:
110767178
NCBI-ProteinID:
XP_021826343
UniProt:
A0A6P5TG79
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MGVVTVSSSASRTPLGLSTKLTSQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR
KKHQKRLGKARKLAKSVKSATTDVASPCTLELDYNEAAAKLENLYKRSPETEANSDVEHV
DGLMRRGRKRRKKTSESDDDKEENRTSNTVVRNRTKKAKRLSLDKRVALKWNKDENAIAS
IIRKRKSRKNENEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL
LEVKENLQKGLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKY
FQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRV
SFGLESVRAEIQKAKLGMLFALKRMPTVDEIIEKVGISPERYHEVMRASKPVFSLHSRHT
TTQEEFINGITDVDGVEGENRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgacagtgtctagctcagcttcaaggactccattaggattgagcacgaaa
ttgacaagtcagagatctacgttgagaaagccattgattgttgcatttaaaacagatgaa
gcaaataagaccgccttggttgcaccccaggagaaaataccattgcctatagaaacacga
aagaagcaccaaaagagactagggaaagctaggaaacttgcaaaaagtgtaaagtctgcc
actacagatgtagcttctccttgtaccttggaattggattacaatgaagccgctgccaaa
ctggaaaacttatacaagcgtagccccgagactgaagccaattcagatgtggaacatgta
gatggcttgatgagaagaggtcgcaaaaggaggaagaagacaagtgaaagtgatgatgac
aaagaagagaacagaacaagtaacactgtggttaggaacaggacaaagaaggctaaaaga
ctgagtcttgataaaagggttgcattgaaatggaataaggatgaaaacgcgattgcttcc
ataattcgaaagagaaaaagtagaaagaacgaaaatgaaaagattgaggagcttgtaagg
gagtattcggcttcaactgatctggttagtttggactggaaaaagatgaagattcctcca
gttcttacatcctcagagcatgcttggttgttcaagctaatgcaacctatgaagggtctt
cttgaagtgaaagagaatttacaaaaaggtttggggagagaaccaaccaatggtgaatta
gctgaggcgacaaatatgagtgtggttcaagtgaaaaaacatttggaagttggtcgagct
gcacgaagcaagctcatcaagcacaatctccgacttgtgttatttgtcatgaacaaatat
tttcaagacttcgcaaatggcccaaaatttcaagacctttgccaggcaggagtgaaggga
cttattacagcaattgatcgctttgaaccaaaaagaagtttccggctttccacatatggt
ctgttctggatcaggcatgccatcatacgctccatgacactctcaagctttactcgtgtc
tcatttggccttgaatcagttagggcggaaatccaaaaagctaagcttgggatgttgttt
gcgcttaaaagaatgccaacagtggacgagataattgaaaaggttggaatttcccctgag
aggtaccatgaagtaatgagggcctcgaaacctgttttctctcttcattcaaggcataca
accacacaagaggagtttataaatggtattactgatgttgatggtgtagagggtgaaaac
aggcggaaacctgcccttctcaggcttgctcttgatgatgtgcttgattcactgaagccc
aaagagagcttggtgatcagacagagatacgggcttgatggtaagggcgatagaacgtta
ggggagattgctggaaacttgaatatttcaagagaaatggttcgaaagcatgaagttaag
gctctcatgaagctgaagcatccagctcgagtagattatcttcgcagatatgtagtataa
DBGET
integrated database retrieval system
