Prunus avium (sweet cherry): 110767218
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Entry
110767218 CDS
T05161
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110767218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110767218
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110767218
Prokaryotic type
Archaeal type
TFB
110767218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_8
WHD_GDS1
HTH_78
Motif
Other DBs
NCBI-GeneID:
110767218
NCBI-ProteinID:
XP_021826386
UniProt:
A0A6P5TH11
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGASK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcgtattgctccgactgcaagcgccagacggaggtggttttcgatcactcg
gcgggagacacggtgtgctctgagtgtggattagtgttggaatctcattccatcgacgag
acctcagagtggcgtaccttcgcgaacgagtccggcgataacgacccggtccgtgttggt
gggcccaccaacccactattggccgatggcgggttgtccaccgtcatagccaagcctaat
ggggcatctggtgagttcttatcttcgtcgttggggcggtggcagaaccgtgggtcgaat
ccggatcggggcttgattctggcattcaaaaccatcgccaccatgtctgataggttgggc
cttgttgcaaccatcaaggatcgggctaatgagatatataagagggtggaagatcagaaa
tctagtagaggaagaaatcaggatgcattattggctgcttgcctatacattgcttgtcga
caagaagacaagccacgcactgtaaaggaaatttgctctgtcgccaatggagcctcaaag
aaggaaattggccgagcaaaagaatatatagtgaaacaactgggactagagaagggtcag
tcagtggagatgggaacaatacatgctggggactttatgaggcgcttctgttccaatctt
ggaatgaataatcaggcagtcaaagctgcccaagaagctgtgcaaaagtcggaagaattt
gatataaggaggagccctatatcgatagcagcagcagttatttatattatcactcagctt
tcagacgataagaagcctctcaaagatatctcagttgctacaggagtagcagaaggaaca
atcagaaactcatacaaagacctttatccccatgtatcgaagataatacccaactggtat
gcaaaggaggaggatctcaagaatctttgcagcccttga
DBGET
integrated database retrieval system
