Prunus avium (sweet cherry): 110767443
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Entry
110767443 CDS
T05161
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110767443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110767443
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
110767443
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
110767443
DNA repair and recombination proteins [BR:
pavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110767443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
110767443
NCBI-ProteinID:
XP_021826673
UniProt:
A0A6P5TH10
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MPELPEVEAARRAIEENCLGKKITKALIADDPKVIDGVSRADFEASLLGKTIVSAHRKGK
NLWLRLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDTDEWPSKYSKLFVELDDGLEF
SFTDKRRFARVRLLKDPASVPPISELGPDALLEPMTGDELFESLSKKKIAIKTLLLDQSY
ISGIGNWVADEVLYQEERTCTSLTSISQGLWLCAIPLFFPGDWKYAQLNSFYMIRKETSN
LHLARIHPEQSAASLSKENYGNLHKSIKEVIEKSLEVGADSSQFPRRKIDFITVGSRTTA
YVPELQKLSGQQAARAGSKQANKRKGHGDGVNDDVNEAASDEEVNGSVQSKKGRKPRGQG
KRSSVKRKSKESDDEDNANDSEDDDDDDNDDHHDEDQKNKTRKVTNNKQSKVEKTSKKTV
QTSQNSKKMKKAK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctaccggaggtggaggcggcccggagggccatagaggaaaactgcctgggg
aagaagataactaaagcgctcatcgccgatgaccccaaagtcatcgacggagtctctcgc
gccgacttcgaggcgtcgctcttgggaaagaccatcgtctctgctcaccgcaagggcaag
aacttgtggctccgcctcgactctcctcctttcccttccttccaattcgggatggcgggt
gctatatatattaaaggggtcgcggtcacgaagtataagaggtctgctgtaaaggacact
gatgagtggccttccaagtattccaagttatttgttgaactggatgatggtctggagttc
tctttcactgacaagaggcgatttgctagagtccgcttgctcaaagatccagcatctgtg
ccccccatatctgagctcgggcctgatgctctcttggagcctatgacaggggatgaactt
tttgaatccttgagcaagaagaaaattgcaattaagactctattgcttgatcagagttac
atttcaggaattggaaattgggttgctgatgaagtactatatcaagaagaaagaacatgc
acttcgctgacctccattagccagggtttatggctttgtgcaattccattattttttcca
ggggattggaaatatgctcaattgaattccttttatatgatacgtaaagaaacttctaat
ttacacctggcaagaattcatccagagcaaagtgctgccagcttgtcgaaagaaaattat
ggaaatttgcacaagagcatcaaagaggttatcgaaaaatcacttgaagttggggcagat
agtagtcaatttccaaggaggaaaattgactttatcacagttggtagcaggactacagcg
tatgtaccagagcttcagaagttaagtggacagcaagctgccagagcagggagtaaacaa
gctaacaagagaaaagggcatggtgatggtgtcaatgatgatgttaatgaagcagcaagt
gatgaagaagttaatggaagtgtgcagtcgaagaaagggaggaagcctagaggtcaaggt
aagaggtcatcagtgaaaagaaaatctaaagagagtgatgatgaagacaatgccaatgac
agtgaggatgatgacgatgatgacaatgatgatcatcatgatgaagatcaaaagaataaa
acaagaaaagtgaccaataataagcaatccaaggtagagaagacatcaaagaaaacagtc
cagaccagtcagaatagtaagaagatgaagaaagcaaaatag
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