Prunus avium (sweet cherry): 110767612
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Entry
110767612 CDS
T05161
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04120
Ubiquitin mediated proteolysis
pavi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110767612
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110767612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110767612
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110767612
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110767612
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110767612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_like
Beta-prop_WDR75_1st
YNR034W-A-like
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110767612
NCBI-ProteinID:
XP_021826886
UniProt:
A0A6P5TIG8
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MKNVSSQFNFPTQEANEKERSSSGTCEWDFNLSTVVSSSVGSTGGAVSNTIGVIEFDPSN
AVVATGGIARKIRVYSFNSLLPSDRFSQANLLDHVTACAYTLCTPAKLSSLRWRPGSDGR
VLCSGDYDGVVTEYDLETRLPIFERDEHGGRRVWSVDYSHSDPVLGASGSDDGTLQMWDP
RCDGGECVASVQPSEARNPVCCVEFDPFGGALVAVGCADRRAYGYDVRKMVDPVLVFDGH
RKTVTYVRFIDGCTVVTAGTDGCLKLWDTEDSREIRTYKGHTNNRSFVGLSVWRNGGLIG
CGSEDNRVYVYDKRWGEPIWLHGFGAVGEGSSGGCDEELGFVSSVCWRQVDEEQCTLIAG
GSDGDLQVFLGRRKPLMLDY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtctcctcacaattcaatttcccaacccaagaagcaaacgaaaaagaaaga
tcatcatcgggaacttgtgaatgggatttcaatctctcaacagttgtgtcttcaagcgtc
ggctccaccggaggagccgtatcaaataccatcggcgtgatcgagttcgacccatcaaac
gcagtcgtagccaccggcggaatcgcaagaaaaatcagagtttacagcttcaactctctg
ctacccagtgatcgattttcccaagccaatttgttagaccacgtcactgcatgcgcctac
actctgtgcaccccagccaagctcagcagccttcgctggcgacccggatccgacggcagg
gtcctctgctcgggagactacgacggcgtcgtcacggagtacgatctcgaaacgcgcctc
cccatcttcgagcgcgacgagcacggcgggcgcagggtctggagcgtcgattactcccat
tcggatccggttctaggggcatccggctccgacgacgggacgctccagatgtgggacccg
cgctgcgacggcggggaatgcgtggctagtgtgcagcccagcgaggctcgtaatccggtc
tgctgcgtggagttcgatccttttggtggggccttggtggccgtcggatgtgcggaccgg
agggcatacgggtacgatgtgcggaaaatggtggacccggttttggtcttcgacgggcat
aggaagaccgtgacttatgtccggtttatcgacgggtgtacggttgtgacagctggcacg
gacgggtgtttgaagctgtgggacacggaggattcgcgggagattcggacgtacaagggg
cacacaaataatcggagctttgtcgggttatcggtgtggaggaatggggggctaatcggg
tgcgggtcagaggataatagggtgtatgtgtacgataagaggtggggcgagcccatttgg
ctgcatgggtttggagcggtgggtgagggtagtagtggtgggtgcgatgaggagcttggg
tttgtgagcagcgtttgctggaggcaagttgacgaggagcaatgcacacttatcgctggt
gggtcggatggggatttgcaggtttttttgggcagaagaaagccattaatgttggattat
tag
DBGET
integrated database retrieval system
