Prunus avium (sweet cherry): 110767718
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Entry
110767718 CDS
T05161
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110767718
03036 Chromosome and associated proteins [BR:
pavi03036
]
110767718
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110767718
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110767718
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110767718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Presenilin
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
110767718
NCBI-ProteinID:
XP_021827039
UniProt:
A0A6P5TIM0
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MPSLDISDYLLAETTPKEKKEKKMKKSKSETLEADSPSTEKKAKKESKLKKRKALDVEAD
EDRSETSSELGEAVNAKSKSEEKTKKKSKKAKVEQEEEPKIEVKKAEEDPNAVSRFRISE
PLKAKLKEKGIESLFSIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLINGPAKA
FRKTGYGRAPTVIVLLPTRELAKQVFADFEFYGGAMGLAACCVYGGSPYQPQEYKLKRGV
DIVIGTPGRIKDHIEKGNIDLSTLKFRVLDEADEMLRMGFVDDVELILGKVGDVSKVQTL
LFSATLPDWVKGISSRFLKPNKKTADLVGNEKMKASHNVRHIVLPCSSSARSQLIPDIIR
CYSSGGRTIIFTETKEAASELAGLLPGARALHGDIQQGQREVTLSGFRSGKFMTLVATNV
AARGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPRRSNVSKIERESG
VKFEHISAPKPVDVAKAVGQDAAEMITRISDSVIPAFKSVAEELLKTSELSAVELLAKAL
AKAAGYTEIKKRSLLSSMENHVTVLLEAGKPIYSPSFAYGVLRRFLPEEKVESVKGMALT
ADGKGAVFDVAAEDLDMFLAGQENAASVSIEVLESLPNLQEKEARGGRFGGGGGFRGGRF
GRGGGSSDRRNDRFSNRSGGGRGRSNYGNKW
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgttagatatatctgattatctactcgccgagaccactccaaaggagaaaaag
gagaagaagatgaaaaagtcgaaaagcgaaaccctagaagccgactctccaagtactgag
aagaaggcgaagaaagagtcgaagcttaaaaaacgtaaggctttggatgtcgaagccgac
gaagataggagcgagactagctcggagctcggcgaggccgtgaatgccaagtccaaaagc
gaggagaagaccaagaagaagtcgaagaaagccaaggtggaacaagaggaggagcccaag
attgaggtgaaaaaggctgaagaggatcctaatgcggtctcgcggtttcggatttccgag
ccgttgaaggccaaattgaaggagaagggcattgagtccttgttttccattcaggccatg
accttcgataccattttggatggttctgatttggtgggtcgggcgcgcactggccagggt
aaaactctggcttttgtgttgcccattttggagtctttaataaatggccctgcaaaagca
tttagaaagactggttatggtagagctccaactgttatcgtacttttacccactagggaa
ctagcgaaacaggtttttgccgactttgagttttatggtggtgctatggggttagcagca
tgttgtgtatacggtggatctccctaccagcctcaagaatataagttgaagagaggggtt
gatattgttattggaacacccggacgtataaaggatcatatagagaagggaaatatcgac
ttaagtaccttgaagttccgggtccttgatgaggctgatgaaatgttgaggatggggttt
gttgatgatgttgaactcattctaggaaaggtaggggatgtaagtaaagttcaaacgctt
ctcttcagtgcaactttgccggattgggtgaaaggcatttcttctaggtttcttaaacca
aataagaaaactgctgatctggttggtaatgaaaaaatgaaggccagtcataatgttagg
catattgttcttccttgctccagttcagcaagatcacaacttattcctgatatcattcgt
tgttatagcagtggaggccgcacaatcattttcactgagactaaggaagctgcttctgaa
cttgctgggttgctgcctggagcacgtgctttgcatggggacatacagcagggtcaacgc
gaggtcacactctctggtttcaggtctggcaagtttatgacattagtggccacaaatgtg
gcagcgcgtggattggatatcaatgacgttcaattaattatccagtgtgaacctccacgt
gatgttgaagactatatccatcgatctggacgcacaggcagagcaggcaatactggagtt
gctgtaatgctttatgatcccagaaggtcaaatgtttcaaaaatcgaaagagagtcaggg
gtgaaattcgaacacataagtgctcctaagccagttgatgttgccaaagcagtaggtcag
gatgcagcagaaatgataacccgaatctctgatagtgtaattcccgctttcaagtctgtt
gccgaggagctacttaagacctctgaactatctgctgtagaactactggcaaaagcgctt
gctaaggctgctggctacaccgagataaagaagagatcacttctatcctctatggagaac
catgtcacagtactcctcgaggctggaaaacctatttattcaccgtcttttgcttatggg
gtcttgaggaggttcttgcctgaggagaaggttgagtcagtgaagggtatggcgctaaca
gctgatggaaaaggcgcagtgttcgatgtagcagctgaagatttggatatgtttcttgct
ggtcaggaaaatgcggctagtgtgagcatagaggtattggaatcactgccgaatttacaa
gaaaaagaagcaaggggaggaagatttggcggtggtggtggcttccgtggtggaaggttt
ggcaggggtggtggttcttctgatagaagaaatgataggttttcaaaccgatccggtggt
gggagaggtcgcagcaactatggaaacaaatggtga
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