Prunus avium (sweet cherry): 110767820
Help
Entry
110767820 CDS
T05161
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
pavi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110767820
03083 Polycomb repressive complex
110767820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110767820
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110767820
Histone modification proteins
HAT complexes
HATB complex
110767820
HDAC complexes
Sin3A-HDAC complex
110767820
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110767820
PRC2.2
110767820
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110767820
Heterochromatin formation proteins
Other heterochromatin formation proteins
110767820
Chromatin remodeling factors
NuRD complex
110767820
NuRF complex
110767820
NuRF complex (fruit fly)
110767820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
110767820
NCBI-ProteinID:
XP_021827169
UniProt:
A0A6P5TJ46
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MKEMRGKGAEETVNERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL
YLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIR
ELPQNSKIVATHTDSPDVLIWDIEAQPNRHAVLGASNSRPDLLLTGHQDNAEFALSMCHS
EPFVLSGGKDKSVILWSIHDHISTLASDPGSARSPGSGGANAKHASKTGGSNDKPTDSPS
IEPRGIYQGHGDTVEDVQFCPTSAQEFCSVGDDSCLILWDTRAGSSPVVKVEKAHDADLH
CVDWNPNDVNLILTGSADNTVRMFDRRNLTSGQVGSPIHTFEGHNAAVLCVQWSPDKSSV
FGSSAEDGVLNIWDHEKIGKKQDSVGSKPSNAPPGLFFRHAGHRDKIVDFHWNASDPWTI
VSVSDDCGSTGGGGTLQIWRMIDLIYRPEEEVLAELDTFKSHLMTCQA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatgagagggaaaggtgcggaggagacggtgaacgagagatacacacagtgg
aagtcgctggtgccagtgctctacgactggctcgccaaccacaacctcgtttggccttct
ctctcttgcagatggggtccgcaactagagcaagccacttacaagaaccgtcagcgcctg
tatctttctgaacagactgatggcagtgttccaaatacacttgtcattgcaaactgtgaa
gttgtcaaacctagggttgcagctgcagagcatatatcacagttcaatgaagaagcgcgc
tctccttttgtaaaaaagtataaaactattatacatcctggtgaggtgaacagaataagg
gaactcccacagaatagtaagatagtggccacacacactgacagtcctgatgttctcatt
tgggatattgaggctcaacctaatcgacatgctgtcctgggagcttcaaattctcgtcca
gatctgctattgaccggtcatcaagataatgccgaattcgctctttctatgtgccactct
gaaccctttgtgctctctggagggaaggataaatcagtgattttgtggagtattcatgat
catatctcaactttagcatcagatccagggtccgcgaggtctccaggatctggaggtgcc
aatgctaaacatgcctctaagactggtgggagtaatgacaaacccacagatagcccttct
attgagccacggggtatctatcaagggcatggggatactgttgaggatgtgcaattctgc
ccaactagtgcacaagagttctgtagtgtaggcgatgattcttgcctcatactgtgggat
acacgagctggctctagtccagttgtcaaggttgagaaagctcatgatgctgatcttcat
tgtgttgattggaatccgaatgacgtcaatctcattcttacagggtctgctgataatact
gttcgcatgtttgatcgccggaacctcacttccgggcaagttggatcacccattcataca
tttgagggtcataatgcagctgtcctctgtgtacagtggtctcctgacaagtcatctgtc
tttgggagttctgctgaggatggtgtattaaacatctgggatcatgaaaagattggtaag
aagcaagactctgttggatcaaagccgtcaaatgctcctccaggattgttcttccgacat
gctggtcatagggacaagattgttgattttcattggaatgcatctgatccgtggacaata
gttagtgtctctgatgattgtggaagtaccggaggtggtggtacactccagatatggcgg
atgattgatttgatttacaggcctgaggaagaagtcctcgcagagctggatacgttcaaa
tcgcacctaatgacatgccaggcgtga
DBGET
integrated database retrieval system
