Prunus avium (sweet cherry): 110767844
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Entry
110767844 CDS
T05161
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110767844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110767844
03036 Chromosome and associated proteins [BR:
pavi03036
]
110767844
Enzymes [BR:
pavi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110767844
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110767844
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
110767844
Noncanonical PRC1 (PRC1.1)
110767844
Noncanonical PRC1 (PRC1.3/1.5)
110767844
Noncanonical PRC1 (PRC1.6)
110767844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-RING_6
zf-C3HC4_5
zf-Nse
Motif
Other DBs
NCBI-GeneID:
110767844
NCBI-ProteinID:
XP_021827195
UniProt:
A0A6P5TJK6
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MPAQKRSLPESLSDSDDEDPTHIHHHQRAKQSRAQDEYQLLQEEEKVVAVEGNEENEEEE
EEEEEHDRDEAGDSEGSPSSTSEEKPEFLFVQLPEIRKDVHCPICLGIIKKTRTVMECLH
RFCRECIDKSMRMGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIEKYEEEELAFHE
EERTRNEQIQASIAQIFQRQSEALIRRRTFGKDTPDAFITRSQRNNRSSFLRRRSSRATE
IQGSVDNEDENDNNNMGKNSSSTDERRTEVTPRRLRRRAGSRSSQPSSSLANSSGGCTEN
DLEVNRENRGISPGIVWSSEMLAWGRGGARSHTRHGISSGCGNKNSRSTRLSKLVDYLRS
IEENNDELDVHLMLISLDKRCTPGLQQPHLCCRPSLSVKHLCDYVSRQTPLLAEEVEFLA
VKGYHSSNDEKLTLNPSSLMNDLDSAPLLVDPCRYDLQILQAEETLGGVKAICTSSRDHL
ILAYRRKEI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacagaagcgttctttgccagagagcctcagcgacagcgatgatgaagaccca
acacatatccaccaccaccaacgagccaagcaatctcgagctcaagatgaataccaacta
ctgcaagaagaagaaaaagtagtagcagtagagggaaatgaagaaaatgaagaagaagaa
gaagaagaggaggaacacgatcgagatgaagcgggcgattctgagggaagcccatcttct
acttctgaagaaaaacccgaatttttatttgtacaactgccagaaattcgtaaagatgta
cactgtccaatatgtcttgggattattaaaaaaacaaggactgtaatggaatgcctacac
aggttttgcagggagtgtatagacaagtcaatgcggatggggaacaatgagtgccccgct
tgccgcacacactgtgccagccgacgttctttgagagatgatccaaattatgatgcccta
atagcagctttatatccagatattgagaaatacgaggaggaggaattggctttccatgaa
gaagagaggactcgaaacgagcagatccaagcatcaattgcccaaatttttcaacgacaa
tcagaagctctaatcagaagacgcacatttggaaaagatacaccagatgcatttattaca
agatcgcagcgcaataatcggagttcctttttaaggagacggagctctcgagccactgaa
attcaaggatctgtagacaatgaggatgaaaatgacaataataacatgggcaaaaattca
tcctccactgatgagcgacgtactgaagttacgccaagacggctgaggagacgggcagga
tctcgatcctctcagccgtcttcatcgctagccaattcaagtggcggatgcactgaaaat
gatttagaagtaaaccgagagaaccgtggaatttctcctggtattgtgtggagctcagaa
atgcttgcttgggggcggggtggtgctcgaagtcacacacggcatggcatttctagtggt
tgcggcaataagaattctcgaagcactcgcttatcaaagttggttgattatctccggagc
atagaggaaaacaatgatgagttagatgttcatctcatgcttatttctttggataaaaga
tgtacaccaggtttgcagcagccgcacctatgctgtcggccaagtttgtcagtcaagcac
ctttgtgattatgtatctcgccagacgcctttgctggcagaagaagttgaatttttggca
gtcaaagggtatcacagttccaatgacgagaagttgaccctgaacccttcatccttaatg
aatgatctagattctgcaccccttctagttgatccatgcagatatgacctgcaaattctg
caagcagaagaaactttgggaggggttaaagccatttgcacttccagcagggaccatttg
attctagcatacagacggaaggagatttag
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