Prunus avium (sweet cherry): 110768088
Help
Entry
110768088 CDS
T05161
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110768088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110768088
03009 Ribosome biogenesis [BR:
pavi03009
]
110768088
04131 Membrane trafficking [BR:
pavi04131
]
110768088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavi04147
]
110768088
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110768088
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110768088
Membrane trafficking [BR:
pavi04131
]
SNARE
SNARE associated proteins
Others
110768088
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110768088
Exosome [BR:
pavi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110768088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
AAA_28
Mg_chelatase
nSTAND3
AAA_18
Parvo_NS1
ATPase_2
nSTAND_NTPase5
Vps4_C
ABC_tran
NB-ARC
AAA_7
Viral_helicase1
TsaE
IstB_IS21
NACHT
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
110768088
NCBI-ProteinID:
XP_021827467
UniProt:
A0A6P5TJW1
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MTDKAESSDSKGTKRDFSTAILERKKAANRLVVDDAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVVRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQI
FKSCLRKSPVSKDVEIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN
PEAMEEDVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD
NPSGAAAGSDPFATVAAGADEDDLYN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaggctgaatcttcagactctaagggaacgaaaagggacttcagcacggcg
atccttgagcgcaagaaggctgcgaatcggcttgttgtggatgatgctatcaacgatgac
aactcggtcgtcgcgctccatccagataccatggagaagcttcagctctttcgtggtgac
acaatcttgatcaagggaaagaaaaggaaggatacaatctgcattgcccttgctgatgat
acatgtgaggaaccaaagataaggatgaacaaggttgtcaggagcaacctaagggttagg
ctgggggatgttgtttctgttcaccaatgtgctgatgtcaagtatggaaagcgtgtccac
attcttcctgtggatgacactattgaaggggtcactggaaatctgtttgatgcatacttg
aaaccttatttcctggaggcctaccgtccagtgaggaagggtgatctcttccttgtacga
ggaggaatgaggagtgtagagtttaaggttattgaaactgaccctcctgagtactgtgtg
gttgctcccgacactgaaatcttctgtgagggggagcctgtgaaaagggaggatgaggag
agattaaacgaggttggctatgatgatgttggtggagttaggaaacagatggctcagatt
cgtgaattagtggagctgccattgaggcatcctcaactatttaaatcaatcggtgtgaag
ccaccaaagggtattctgctgtatggacctcctggatcaggtaagactctaattgcccga
gctgtggctaatgaaactggggcattctttttctgcatcaatggacctgaaatcatgtca
aaattggctggggagagtgaaagcaatctcaggaaagcttttgaggaagcagagaagaat
gcaccatcaattatctttattgatgaaattgattcaattgctcccaagagagagaagaca
catggagaagttgagaggaggattgtttcccagctcttgacgctcatggatggactaaag
tctcgtgcacatgtaattgttatgggggctacaaatcgaccaaacagtattgatccagct
ctcagaaggtttggaagatttgatagggaaatagatattggtgtaccagatgaagttggg
cgtctcgaggttgtccgtattcatacaaagaacatgaagcttgctgaagatgttgatttg
gaaaagatagctaaggacacacatggttatgttggtgctgatctggctgctttgtgtact
gaggctgctcttcaatgcatcagagagaagatggatgtgattgacttagaagatgaggaa
atagatgctgagattctgaattcaatggcagttacaaatgagcacttcaagactgctctt
ggcacaagcaacccatctgctcttcgtgaaacagtagttgaagtgcccaatgttagctgg
gaagatattggaggtcttgagaatgttaagcgagaacttcaagagactgttcagtatcct
gttgagcatcctgagaaatttgagaaatttggaatgtcgccttcaaagggagttcttttc
tatggtcctcctggatgtggtaaaactcttctcgccaaagctattgccaatgagtgtcaa
gcaaacttcatcagtgtcaagggacctgaattgctaacgatgtggtttggagagagtgag
gccaatgtgagggaaattttcgacaaggcccgtgggtctgctccatgtgtcctgttcttt
gatgaacttgattccattgctacacagagaggtagtagcgtaggtgatgctgggggtgca
gctgacagggttttgaaccaactccttacagaaatggacggaatgactgctaagaaaact
gttttcattattggggctaccaacagacctgacattatagaccctgcacttctacgtcca
ggacgtctggatcagttaatttacatccctctccctgatgaggaatctcgctttcaaata
ttcaaatcttgcttgaggaaatctccagtttccaaagatgtggagatcagagcccttgcc
aagtacacccaaggattcagtggtgctgatataactgaaatatgccagcgtgcttgcaaa
tatgccattagagagaatattgagaaggatatcgagagggagaggaggagaagcgaaaat
cctgaggctatggaggaggatgttgatgacgaagtagcagagatcagggcagctcatttt
gaggagtcgatgaagtatgctcgtaggagtgttagtgacgctgatatccgcaaataccag
gcatttgcgcagacattgcagcagtcaagagggtttggaaccgagttcaggttcgcagac
aatccttctggcgcagccgctggatctgacccttttgcaactgttgctgctggggctgat
gaagatgacctgtacaactag
DBGET
integrated database retrieval system
