Prunus avium (sweet cherry): 110768166
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Entry
110768166 CDS
T05161
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
pavi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110768166
03460 Fanconi anemia pathway
110768166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110768166
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110768166
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110768166
FA (Fanconi anemia) pathway
Downstream FA components
110768166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Pex19
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
110768166
NCBI-ProteinID:
XP_021827545
UniProt:
A0A6P5TKH6
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MVSATPARNPNPTPKSSKNGYQIGGLQVEFPYHPYGPQLAFMSRVISTLDRAHRDGHCHA
LLESPTGTGKSLSLLCSTLAWQQNYKSKHTYANLSHSKPDPKAMTDPTAHGGGFVPEEEP
ASVQLSEKPKPSQFVANNKDQKKQTTPTIYYASRTHSQISQVIREYRKTSYRVPMAVLAS
RRHYCTNAQVHGKENIDEECKHLLKNQEVGCLEFKNVQKVKGHASLKKGGCHEAHDIEDL
VKVGKVVKGCAYYAARSLSDDAELVFCPYNYIINPVIRGAMEVDIKGSIVVLDEAHNIED
VARDAGSVDIEEDILHKLQMELEQLCPVDVLVYQPLYEMIQGLISWIERKKNKLEKREFQ
HYVSCWTGDKALRELQEANVSQQYFPILLECATKAFKAATDKESDTPHLSGMAVVTLEGL
VSSLTYFFSRNGCHMVDYQLALQRYVKREAGSSGDWTHTLSLWCLNPAVVFKDIADLSLS
VILTSGTLSPMNSFSSELGLQFGTTLEAPHVIDVESQVWPAVISTGPGTLSLNASYKTAD
EYAFQDALGKSLEEIFKIVPGGCLVFFPSYKLMGKLCKRWRGTGQWSQLNEKKNLFVEPR
GGDQEEFDSVLRGYYDSIHQGNKPVFRRKKSANKTSIKNHFAGVQCAGKNNTDGAAFLAV
CRGKVSEGIDFTDDNARAVIIVGIPFPNINDIQVALKKKYNDTYKSSKSLLSGNEWYCHQ
AFRAVNQAAGRCIRHRFDYGAVILLDERYREERNTAYVSKWLKKSIRRYENFDKSLEELK
SFFSDVKERVSNNMVNVSQTFETKEENIHSMGQSEGFTKVKEKKLKKFDPCEQPENSEMK
HDALLKSQDALEVQKFVRINEDADHSKEIIDPECRLQKDSRYPKPSLFTAFSDADPDISI
VQETPNMDGIISTYSPGYLNKDENSGSTSSTIEASSDFTDHLSFQSASLTNSSKASPKAQ
CGFAATPEKNVNLSIQSSMLEIDSYLNLSVNSHTQKRRKSMYSPLANFVCGQCDAPDSRS
PDSTSSVRSMATIDTNRRIEFSVETNCSGHKSNVPHVLTTSNLVASSMSVVCVMDKRLQI
SCLLCKTPLGLPENHLYLACSITSSSKFHLESLHKEVLKSHTGNTSTGIPVIITDISSVD
QRLCNRTSEGAPRQGIWCEEDGCVFSTIFCPFCISHSNCLGVQVMAANASNVHLLNKMLF
YLDQLHIQNLEASSDRASEEKDILPVVDPSLDKASILNSFDKFSYSPLEQNTGGWRTTKS
KLKLPKRRLLPEAEG
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgcgactccggcaagaaaccctaaccctacccctaaaagctccaaaaatggg
taccaaatcggaggtctccaggtggagttcccgtaccatccgtacgggccccagctggca
ttcatgagcagggtcatctccactctagatcgagctcacagagacggccattgccacgca
ttgctcgagtctcctacagggactggcaaatcgctttctcttctgtgctctactctcgct
tggcaacagaattataagtctaagcatacgtacgcaaatctctcgcattccaaacccgac
ccgaaggccatgaccgatccgacagctcacggcggtggctttgttcccgaagaggaacct
gcaagcgttcaactatcagaaaagcccaagccatcccaatttgtggcaaataataaggat
caaaagaagcagacaacgcctaccatatactatgcatcgaggacgcattcacaaatttct
caagtcatacgtgaatatcggaaaacttcctaccgggtgcctatggcagtgttggcttca
aggaggcattactgcacaaatgcacaagtgcatgggaaagagaatattgacgaagaatgt
aagcatcttttgaagaaccaagaggttggatgtctggaatttaaaaacgtacaaaaggtc
aaaggccatgcatcccttaagaaaggaggctgccatgaggcccacgatattgaagatctt
gtaaaagttggaaaagttgtgaaaggctgtgcatattatgcagctcgttctttgtcagac
gatgcagaattggttttttgcccatataactacatcattaatccagtcattaggggagca
atggaagtagatattaagggatccattgttgttctcgacgaagcccacaatatagaggat
gttgctcgtgatgctggaagtgtcgatattgaagaagacattttgcacaaattgcagatg
gaactggagcagctttgcccagtggatgttttggtataccaacctttatacgaaatgata
cagggcctcataagttggattgagcgaaagaaaaataagttggaaaaacgtgaatttcag
cactatgtctcttgttggactggtgataaggctttgagagagcttcaagaagctaatgta
tcacagcagtacttcccaatcttacttgaatgtgccacaaaggcattcaaagctgcaaca
gataaagagtcagatacaccacatttaagtggcatggctgttgtgacattggaaggattg
gtctcttcactcacttactttttttcaagaaatgggtgtcatatggttgattatcagctt
gctttacaacgatatgttaaaagagaggctggatcttctggggactggacacatacctta
agtttgtggtgcttgaaccctgctgttgtgtttaaagatattgctgatctttcattgtcc
gtcattttaacatcagggactctgtcaccgatgaattccttttcatctgagcttggactt
cagtttggaacaacgctggaagctccacatgtaattgatgttgaatcacaggtttggcct
gctgttatttctactggcccgggtaccttatcattgaatgcaagttataagacagcagat
gaatatgccttccaggatgcacttggaaaatccttggaggaaatttttaagattgttcca
ggcggctgtcttgtgttcttcccaagttataagctgatgggaaaactatgcaagcgttgg
cgtggaacaggacaatggtctcagttaaatgaaaaaaagaacctttttgttgagccaaga
ggaggagaccaggaggaattcgattctgttttgaggggttattacgattcaattcatcag
ggtaataaaccagtttttcggagaaagaaaagtgccaacaagacatcgatcaaaaatcac
tttgctggagtccagtgtgcaggcaaaaataacactgatggagctgcttttcttgctgtg
tgccgaggaaaggtttcagaaggaattgacttcacagatgacaatgctcgagcggtgata
attgtcggcattccatttcccaacataaatgatattcaagttgccttaaagaagaaatat
aatgatacatataaatcatccaaaagccttctgagtgggaatgagtggtactgccaccaa
gccttccgagctgtaaatcaagctgcaggacgttgtattcgccataggtttgactatgga
gctgtcatcttattagacgaacgctatcgggaagaaagaaataccgcatacgtgtcaaag
tggctaaagaaatccattagacggtatgagaactttgacaagtcattggaggaattaaaa
tcctttttcagtgatgtcaaggaaagggtaagcaataacatggttaacgtatcacagact
tttgagactaaagaagaaaatattcattctatgggtcaaagtgaaggatttacaaaagtg
aaagaaaagaaattgaagaaatttgatccctgcgaacagccagagaattctgagatgaag
catgatgccctgctgaaatctcaagatgctttggaagttcagaaatttgtgcgaataaat
gaggatgcggaccatagcaaggaaattattgatccagaatgtcgtcttcagaaagattca
aggtacccaaagccatctttgtttacggcattctctgatgcagatcctgacatttccatt
gtccaggaaacccctaatatggatggtatcatttccacatacagtccagggtacttgaat
aaggatgagaattctggttcaacttcaagcacaattgaggcctcttctgactttacagat
catttgtcatttcagtcagcatccttaaccaatagtagcaaagcttctccaaaagcccag
tgtggctttgcagctactcctgaaaagaatgtgaatttgagcatacagagctcgatgcta
gaaatagactcatatttgaatttgagtgtaaattctcatacccaaaaaaggagaaagtcc
atgtattcaccgctggctaactttgtttgtggacagtgtgatgctcctgattccagaagc
cctgattctactagttccgtaagatcaatggcaactatagacacaaatcgccgaattgaa
tttagtgttgagactaattgttcaggacacaaatccaatgttcctcatgtgctcacaact
agtaatttggttgcttcatccatgtccgttgtttgtgtaatggacaaaagactacaaatt
tcttgcttactctgcaaaactccattgggccttcctgagaatcatctatatctagcatgc
tcaataacttcgtcatcgaaatttcacttagaatctcttcataaagaagtattgaagtct
cacactgggaacacatccacaggcatacctgttatcataactgacatttcatcagttgat
cagcgactctgcaacagaacttctgaaggtgctcctcggcagggtatatggtgtgaagaa
gatggttgtgttttcagtaccatcttctgccccttctgcattagccacagtaattgcctt
ggagtacaggtcatggcggctaacgcatcaaatgttcatttactgaacaagatgctgttt
tacttagatcagttgcatattcaaaatcttgaagcgtctagtgacagggcttcagaagag
aaagatatcttgcctgttgttgatccaagcttggataaagcttctattctaaattccttt
gataaattctcatactccccactagagcagaacacgggaggctggaggactacaaaatca
aagcttaaactacccaaaagacgcttacttcctgaagcagagggttaa
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integrated database retrieval system
