Prunus avium (sweet cherry): 110768275
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Entry
110768275 CDS
T05161
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03030
DNA replication
pavi03420
Nucleotide excision repair
pavi03430
Mismatch repair
pavi03440
Homologous recombination
pavi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110768275
03420 Nucleotide excision repair
110768275
03430 Mismatch repair
110768275
03440 Homologous recombination
110768275
03460 Fanconi anemia pathway
110768275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavi03000
]
110768275
03032 DNA replication proteins [BR:
pavi03032
]
110768275
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110768275
Transcription factors [BR:
pavi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110768275
DNA replication proteins [BR:
pavi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110768275
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110768275
MMR (mismatch excision repair)
110768275
DSBR (double strand breaks repair)
HR (homologous recombination)
110768275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
CDC24_OB3
RADX
DUF223
zf-CCHC_3
RADX_2nd
zf-CCHC_5
DUF8448
Motif
Other DBs
NCBI-GeneID:
110768275
NCBI-ProteinID:
XP_021827671
UniProt:
A0A6P5TKZ3
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MAVKLTEGAIMKICTGEYHDETWKPILQVLDVRMVNTARSGAQPGPDNERYRVLISDGSH
HQQGMLGTQKNTLVQQGLLQKGSIVCLKQFTCTQVQNRLIIIIIELDLVLDKCDLIGEPV
AGPKYLNAQSSGALPGNAQSIGGSAHSGGAVHQTVTKATPEQPRVNQSYGSTYSGGSDPG
RHATMSTTPNHPKPETGFGFPGSAPLSGSYSNQNTGFRSPRPEVPQPTLNAYARPPQPTY
QQPSPTYPNRGPVAKNEAPPRIMPIAALNPYQGRWTIKARVTAKGELRHYSNPRGDGKVF
SFDVLDSHGGEIRATCFNAVADQFYNQIEVGKIYLISKGSLKAAQKAFNNLNNDHEITLD
HTSIIQPCFEDDDSIPKQNFRFCRISDVEGLNNNSIVDVIGVVSSINPPASIMRKNGVET
QKRSLQLKDMSGRSIEVTLWGNLCNAEGQRLQSMCDSGAFPVLAVKGAKVNDFNGKAVGT
IPSSQLFIEPNIEQAREMRSWFDREGRNTPCIPISRETAGVGRTDIRKTISQIKDERLGI
SEKPDWITVGGTVSFIKVDSFCYSACPLMNGDRQCSKKVTNNGDGKWRCDRCDQSMEECD
YRYLLQLQIQDHTGTTWVTAFQEGGEEIMGIPAKDLYFLKYEEQDDEKFVEITRKVLFTK
FNFKLKIKEEIYGDEQRVKSTVLKAEKVNFSSEARFHLELMNKLKMETISSSASEGDNVM
PSAGMNATGVGNTVSRQPTLDVNVGYNNNAGREFGGPESQGGTYRNQFSSARFPSTGSVG
SYLSCNSCGDAGHSSVNCPSVMNGPGQSSGAGYNNRVSSRPGVGNTSGDCYKCHQPGHWA
RDCPGLNTTPAYGGSGGNPVRYGGVANQRVGGF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaagctaacagagggggcgataatgaagatttgcacaggggagtaccatgac
gagacctggaagcccatcttgcaagtgctcgacgtgaggatggtcaatacagctcgcagt
ggggcccagccgggccccgataacgagaggtacagggttttgatctcggatggttcccac
caccagcaggggatgctgggcacccagaagaacacactggttcagcaaggcctgcttcag
aagggctccatcgtttgcttgaagcaattcacttgtacccaagtccaaaaccgcctgatc
atcattataattgaattggatttggtgcttgataaatgtgatctcattggagagcctgta
gcaggacctaaatatctgaatgcacagtcctcaggggcattaccaggaaatgcccaatct
attggtggcagtgcacattctggtggcgcagttcatcaaactgtgactaaagctactccg
gaacaacctagagtaaatcaatcatatggtagtacttattctggtggttctgacccagga
agacatgcgacaatgagtactactcccaatcaccctaaaccagagactggttttggtttt
cctggatcagcaccattaagtgggtcatatagcaatcagaacacaggttttcgcagccct
agacctgaggttccacagccaactctaaatgcttatgctcggccgcctcagccaacttat
caacagccatctccaacatatcctaatagaggaccagttgccaaaaatgaagcccctcct
agaataatgccaattgctgctctgaatccataccaagggcggtggacaatcaaggctaga
gtgacagctaaaggagaacttaggcactacagcaatcctcgtggtgatgggaaagttttt
tcttttgatgttcttgattctcatggtggagaaattcgagcaacctgttttaacgctgtg
gctgatcaattctacaaccagattgaagttggcaagatttatttgatctccaagggtagt
ttaaaagcagcccaaaaggctttcaacaaccttaacaatgatcatgaaattactttggat
cacacatcgataatacagccatgttttgaggatgacgactcaattccaaagcagaatttc
cgtttctgtcgtataagtgatgttgaaggcttgaacaacaactctattgtcgatgtaata
ggtgtggtatcctccatcaatccccctgcttctataatgaggaaaaatggtgttgagact
cagaagagatccctccagttgaaggatatgtctggtcgtagtattgaggtaactctatgg
ggaaatttgtgcaatgcagagggacaaagactgcaaagtatgtgtgattctggtgcattc
ccagtgctggctgtaaaaggtgctaaagttaatgatttcaatgggaaggcggtagggacc
attcctagtagtcagctttttatagagccgaatatcgaacaggctcgcgagatgaggagt
tggtttgacagggaaggaagaaataccccatgtatccctatttccagggaaacagcaggt
gtgggtagaacagatatccgaaagactatatctcaaattaaagatgagcggctggggatt
tccgagaagccagactggatcacagttggtggaactgtttcatttataaaggttgatagt
ttctgctattcggcatgcccactcatgaatggtgatcgacaatgcagcaaaaaagttaca
aataatggagatggcaaatggaggtgcgatagatgtgatcagtccatggaagaatgtgac
tacagatatttactccagttacagatacaggatcatactggcacaacatgggtaacggca
tttcaggagggtggtgaagaaatcatgggtatacctgcaaaagatttgtattttttgaaa
tatgaagagcaagatgatgagaagtttgtagaaatcactcggaaggttctctttactaaa
ttcaatttcaagttgaaaataaaggaggagatttatggtgatgaacaacgtgtaaaatca
acagttttgaaagcagagaaggtaaacttttcatcggaggctagatttcatttggaattg
atgaataaacttaagatggagactattagttcttctgcctccgagggggataatgtaatg
cccagcgctgggatgaatgctactggagttgggaacactgtaagtagacaacctacacta
gatgtgaatgttggttacaacaacaatgctggtagagaatttggaggaccagaaagtcaa
gggggtacctatcgaaaccagtttagtagtgctaggtttccttcaactggctctgttggt
tcatatctgagctgtaacagttgtggggatgctggccatagctcagtgaactgcccaagt
gtaatgaatggcccagggcagtcatcaggagcgggctataacaacagagtatcttctagg
ccaggtgttggcaatacttctggtgactgctacaaatgccaccaacctggacactgggca
agagactgtcctggcttgaacaccactccagcttatggaggcagcggaggcaaccctgtg
agatacggaggtgttgcaaaccagagggtcggtggcttttga
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integrated database retrieval system
