Prunus avium (sweet cherry): 110768461
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Entry
110768461 CDS
T05161
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pavi03000
]
110768461
Transcription factors [BR:
pavi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110768461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
110768461
NCBI-ProteinID:
XP_021827885
UniProt:
A0A6P5TLD9
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MWPSSGPPSRPLSYSHLPPEMAGMVGLRDVFVVAPAAAYHHNNHHHLHHHHHDPNLLSPS
SDPHHNINASTNPATALGVGVGVPVIPLLTATPCLAPPNISNVDDDEDNNAHTPTGMSMG
MGMGMGMGMGMGMGMGMMSSGQHRNNRSAGGGGGGGIQLWQQTQPHFFKKTPHDLAATSL
GGTHLVQGGGGGGVGNNVMNSSSAAASGASTMTCQDCGNQAKKDCTHRRCRTCCKSRGFD
CATHVKSTWVPAARRRERQLMSGAAGGGAGSNSGSTSSAKKPRLIGASQTTTSHTSTSNT
TPPRSYDTSSSHQDAGFKESLPSQVRAPAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFK
GFLYDQGVESREGFPNISELHLGGGGGTSGGGNGGRNGASSPILDTSDVYGASSGGLLGG
SNFGNPIN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtggccctcctccggccctcccagcaggcccctctcctacagccacctccctcccgag
atggccggcatggtcggcctccgagacgtcttcgtcgtggcccctgccgccgcctaccac
cacaacaaccatcaccacctccaccaccaccaccacgatcccaatctcctctccccctcc
tccgaccctcaccataacatcaacgcctccaccaaccccgccaccgctctcggtgtcggg
gttggcgtccccgtcatccctctcctcaccgccaccccttgtcttgccccgccaaatatc
tcaaatgtcgacgatgacgaagataacaatgcccacactcctacaggtatgagcatgggc
atgggcatgggcatgggcatgggcatgggtatgggtatgggaatgggtatgatgagcagc
ggccagcatcgaaacaaccgaagcgcgggaggaggaggaggaggaggaattcagctgtgg
cagcagacccagccccacttcttcaagaaaactccacatgatctggctgctacgagtctc
ggcgggacccacttggttcaaggtggtggcggcggaggagtagggaacaacgttatgaat
tccagctctgccgctgcctccggggcgtcaacaatgacgtgtcaagattgcgggaaccag
gcgaagaaggactgcacgcacaggcggtgcaggacgtgctgcaaaagccggggcttcgac
tgtgccactcacgtgaagagcacgtgggtaccggcagctcggcggagagagaggcagctg
atgtcaggtgcggctggaggtggggctgggtctaattctgggtctacatccagtgccaag
aagcctaggctcattggcgcctcccaaacgacaacgtctcatacttccacttcgaacacc
accccccctagaagctatgatactagctctagtcaccaagatgctggtttcaaggagtca
ttgccgagccaagtacgtgctccggcggtgttcaagtgcgttcgggtgactgcggtggaa
gacggtgacgatgagtatgcatatcaggcagttgtgaaaattggtggccacgtgttcaaa
gggttcttatatgatcaaggggttgaaagtagagaagggtttcccaacatctccgaattg
catttggggggtggtggcggcactagtggtggtggcaatggtggacgaaacggggcttct
tccccgattctcgacacgtcggacgtttatggggcgtctagtggaggattgctgggaggt
tcaaactttggtaatccaataaattga
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