Prunus avium (sweet cherry): 110768492
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Entry
110768492 CDS
T05161
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110768492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110768492
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110768492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
AAA_16
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
110768492
NCBI-ProteinID:
XP_021827930
UniProt:
A0A6P5TLI7
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MEHHQHVIDIEDESPNNSTAVGPPVVVLSSDDEDNGSRRPLHLYQKLVLEHPPDHDQHVI
NLEDESQNNITARAPPVIVLSSDDEDSGSRRPVHLNQKVVLEPVGRLLKKNMTDSVEGKD
QSSELETLLRDFDIWIDKDVNVGVADNMDCLESKDEREELKTVSGKVDIWIDKDIDVGFE
DNMVIDDCVESKDQTEKLETLPEKVDIEIAEDAAENMDHAESKAQTEELETLSSKIDTGI
DKEINVGAAYLMVIGKGNQRSSEKEECNWKTNYQETNRECITPSTEVGVLAGNMDVGTDK
PDHVIGEYEHDKVVGEGNQDTFQIKEQYQKNDIDEDDLAEIWKEMAIATECSKDIAVDPS
ADETSGVCGEECDHFFILKDDLGLVCRICGVVQQGIETIFEFQYSKAKRTKRTYMYESRN
ANTTESTQSFSVGLKSTKDFLIATKIYAHPTHRNEMKPHQVEGFNFLSSNLLTDNPGGCI
LAHAPGSGKTFLIISFVQSFLARFPHARPLIVLPKGILATWKKEFKKWQVEDIPLHDFYT
SKADNRSQQLDILKQWVEQKSILFLGYQQFSTIMCDNGISRTSIDCQEILLKVPRILILD
EGHTARNEDTNMLQSLARVQTPLKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDTSRAVV
NRIMSRVQISGVRKQLKTGTNLALFDLIEHTLQKDEDFRRKVAVIQDLREMTRKVLHYYK
GDSLDELPGLVDFTVVLNLSSRQKLEVKKLNKLDYFKKASVGSLVYMHPELKSLTDKYSS
TGGKGSEIDNKEMDKLVENINLRDGVKAKFFLSILGLCESTGEKLLVFSQYITPLKLMER
LAVKVKDWSLNKEIFMITGDSNSKHRQQSVERFNISADAKIFLGSIKACGEGISLVGASR
ILIMDVQLNPSVTRQAVGRAFRPGQKKKVYVYRLVAADSPEEEDHFICCRKELISRMWFE
WNESCGDQDFYMKTVDVNECGDMFLESRLLQEDIKVLQKR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcatcaacatgtcattgatatagaggatgagagtccaaacaatagtacagca
gtaggaccgcctgttgttgtccttagttcggatgatgaagacaatggaagtaggaggcca
cttcatctgtatcagaagcttgtgttggagcatcctccagaccatgatcaacatgtcatt
aatttggaagatgaaagtcaaaacaatattacagcacgagcaccgcctgtcattgtcctg
agttctgatgatgaagacagtggaagtaggaggccagttcatctaaatcagaaggttgta
ttggagcctgttggaagattgctaaagaagaacatgacggattctgtagagggcaaagat
cagagtagtgagttggaaactctgcttagagatttcgatatttggatagataaagatgta
aatgttggtgtagcagacaatatggattgtttagagagcaaagatgagagagaagagttg
aaaactgtgtctggaaaagttgatatttggatagataaagatatagatgttggttttgaa
gacaatatggtgattgacgattgtgtagagagcaaagatcagacagaaaagttggaaact
ttgcccgaaaaagtcgatattgagatagctgaagatgcagcagaaaatatggatcatgca
gagagcaaagctcagacagaagagttggaaactctatccagtaaaattgatactgggata
gataaagagatcaatgttggtgcagcataccttatggtgattggaaaagggaatcaaaga
tcttctgaaaaagaggaatgtaattggaaaactaattatcaagagactaacagggagtgc
ataactccaagcacagaggtaggagttctggctggtaacatggatgttgggacagataag
cccgatcatgttattggagaatatgaacatgataaggtggttggggaaggtaatcaagac
actttccagattaaagaacagtatcagaaaaatgatattgacgaagatgatctagcagaa
atatggaaggagatggcaattgcaacagaatgttccaaggatattgctgttgatccttca
gctgatgaaacatctggtgtatgtggggaagaatgtgatcactttttcatcctgaaggat
gatcttggattagtttgtcgtatatgtggagttgttcaacaaggaattgaaactatattt
gaattccaatatagtaaggccaaaaggactaaacgaacttacatgtacgagtcacggaat
gccaacactaccgagtcaactcagagtttctcagttggactgaagtctactaaggatttt
ttaatagcaacaaaaatttatgcccatccaacgcatagaaatgaaatgaaaccacatcag
gtggagggctttaattttctttctagcaacttgctgacagataatccaggcggttgcatt
ttggctcatgcccctggttctggaaagacttttctgattataagttttgtgcagagtttc
ctagctaggttcccccatgctagaccactgattgttctacctaaaggcattctggctaca
tggaagaaagagttcaagaaatggcaggtggaggacattccgttgcatgatttttacact
tccaaagcagataaccggtctcagcagctggatattttaaaacaatgggtagagcagaag
agcatcctttttttagggtatcaacagttctctactataatgtgtgacaatggaatcagt
aggacatcgattgattgtcaagaaattctgctgaaggtccctcgcattcttattttagat
gaaggtcacactgcaaggaatgaggatacaaatatgcttcagtccctcgcaagagtccaa
acacctctaaaagtcgtcctctcaggaaccctatatcaaaaccatgtgaaagaagttttc
aatattttaaatcttgttcgtcccaagtttctgaaattggatacttcccgggctgttgtt
aatcggataatgagcagagtgcagatatcaggtgtgaggaaacaattgaaaactggtaca
aatttagctctgtttgacttaatagaacacactctccagaaagatgaagattttagaagg
aaagtggctgtcatacaagatcttcgagaaatgaccaggaaggtcctgcattattacaaa
ggagattctctggacgaacttccaggacttgtggatttcaccgttgtacttaatcttagt
tcaagacagaaacttgaagtgaaaaagttgaacaaattggattacttcaagaaagcttct
gtggggagtcttgtgtatatgcatccagagttgaaatctcttacagacaaatattcgtca
actggaggaaaaggctctgaaattgacaataaggagatggataaacttgtagaaaatata
aatttgagagatggagtaaaagctaagttctttcttagtatactaggcctatgtgaatca
actggtgagaagttgctggttttcagccagtatattacgcccctgaaacttatggagaga
ttagcagtgaaggtaaaggactggagtctaaacaaggaaattttcatgatcactggtgat
tcaaattctaagcataggcaacagtccgtggaacgctttaacatttcagctgatgctaaa
atcttccttggctccattaaagcttgtggggaaggaatctctctagtgggggcttctcga
atcttaattatggatgttcaacttaacccttcagttactcgccaggcagtaggccgtgca
tttagaccaggacaaaagaagaaagtatatgtctatagattggttgctgctgattcgcct
gaagaggaagaccactttatctgctgtaggaaggaattgatttcaagaatgtggtttgag
tggaacgagagctgtggagaccaagatttttatatgaagactgttgatgtcaatgaatgt
ggtgatatgttcttggaaagtcgattgttgcaggaagatataaaagttttgcagaaaagg
taa
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