Prunus avium (sweet cherry): 110768524
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Entry
110768524 CDS
T05161
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00300
Lysine biosynthesis
pavi00470
D-Amino acid metabolism
pavi01100
Metabolic pathways
pavi01110
Biosynthesis of secondary metabolites
pavi01230
Biosynthesis of amino acids
Module
pavi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
110768524
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
110768524
Enzymes [BR:
pavi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
110768524
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
110768524
NCBI-ProteinID:
XP_021827970
UniProt:
A0A6P5TLM9
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MAATQLPYQTSSSSFSKPLKHPLTRNPFSQNPILPLRPASLKPLVLRAVVSQNPSKSLTQ
DPQTTPFKHCFSKSSDGFLYCEGLKVQEVIDSVERRPFYLYSKPQITRNVEAYKEALEGL
SSVIGYAIKANNNYKILEHLRQLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKLLEDL
VLAAQEGVFINVDSEFDLENIVAAARIAGKRVNVLLRINPDVDPQVHPYVATGNKNSKFG
IRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVKYIDEIRSQGFEV
DYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRDVVQSQGLNLIIEPGRSLIANSCCLVNRV
TGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPAPPGAEISTFDVVGPVCESADF
LGKDRELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSVAKIRHAETFED
HMRFFDGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacgcagctcccttaccaaacctcatcatcatccttctccaaacccctaaag
caccctttaacccgaaacccattttcccaaaaccccattctacccctcagacccgcctcc
cttaaacccctggttctcagagccgtcgtctcccaaaacccatcaaaatccctcacccaa
gaccctcaaacgaccccctttaagcactgcttctccaaatcctcagatgggtttctctat
tgtgagggcctcaaggtacaggaagtcatcgattcggttgagaggcggcctttctacctc
tacagcaagccacagatcactagaaacgtcgaggcctataaggaggcattggaggggttg
agttctgttattgggtatgcgattaaagccaacaacaattacaagatattggagcatctg
agacagttgggttgtggtgctgttctggttagtgggaatgagctcaggttggcccttcga
gctgggtttgatcccactaagtgcatttttaatgggaatggaaagttgttggaggacttg
gttttggctgcccaagaaggtgtttttatcaatgttgatagcgagtttgacttggaaaat
attgttgctgctgcaagaattgctggaaagagggtcaatgttctacttcggattaatcca
gacgtagaccctcaggttcatccatatgttgccactgggaacaagaactccaaattcggt
attagaaatgagaagctgcaatggtttttggatgctgtgaaggcacatccaaatgagcta
aaacttgttggcgcccattgtcatcttggatccactattaccaaggtggatatatttcgg
gatgctgctgttcttatggttaagtacattgatgaaatccggtctcaaggttttgaagtt
gattacttaaatattggtgggggacttgggatagattactatcatgctggtgctgtactt
ccgacacccagagatcttattgacactgttcgcgacgtggtccagtcacagggtctaaat
cttatcattgaacctgggagatcacttattgcaaattcttgctgcttggtcaatcgagta
acaggtgtcaaaacaaatggcaccaaaaactttatcgtgatcgatggaagcatggctgaa
ctcattcgcccaagtctgtatgatgcttatcaacatatagagctggtttctcctgctcca
cctggtgctgagatttctacttttgatgtggttggccctgtttgtgagtctgcagatttc
ttagggaaggatagagaacttccaactccacccaagggagctggtctggttgttcatgat
gcaggcgcttactgcatgagcatggcttcaacttacaatcttaaaatgcgacctccagaa
tattgggttgaagaagatggatcagtggccaagatccgacatgcagagacatttgaagat
catatgcgattctttgacggtctttga
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