Prunus avium (sweet cherry): 110768535
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Entry
110768535 CDS
T05161
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110768535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110768535
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110768535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
110768535
NCBI-ProteinID:
XP_021827982
UniProt:
A0A6P5TKD7
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All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MESPLDLTPIKTSYDGLYSKGYKRMKVCFDTNDYDSMDFSPSNHDEAVHKKPKSTSEVVD
YSDPFAIPDLLERIDSGKYGSVTKEIEAILARKRQTLSPYFEKYPALSNLSLEEKRQSKR
APKSANQQASPLAQNNVIDLEDDSVENNAPAALLPVVIIDSDEEQSEHPRPPYPFKEVVL
PEPSYSFREVFLGQPSEQSVVRDFVENKVPGETEIKNDPGVYVGVEDDDNHQTDTEEDDG
LGDIWNEMSMALESNKDVVVDPSSEGMSDGGEDCDCDHSFVLKDDLGYVCRICGVIDRGI
ETIFEFQFNKVKRSTRTYMPDSRNAKDREAAEISGVKLSEDGLIITEISAHPRHMKQMKP
HQVEGFNFLVSNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPNARPLIVLPKGIL
DTWKKEFKIWQVEDIPLYDFYESKADNRSQQLEVLKQWVEQKSILFLGYKQFSSIVCDRE
TSKISAMCQEILLKAPSILILDEGHTPRNDNTDVFQSLTKLQTPRKVVLSGTIFQNHVNE
VFNLLNLVRPKFLRSETSRPIIKRIMSRVHISGVRKQFKAGSESAFYELVEHTLQKDNDF
RRKVTVIHELREMTSKVLHYYRGDSLDELPGLVDFTVLLNLTPRQKHETEKLKKFARKFK
QSSVGSAVYLHPKLYSFSWKPADPDDKVDELLDKMDVKDGVKARFFLNLLNLCESAGEKL
LVFSQYLLPLKFLERLVAKMKGWSPGREMFMISGESSSEQREWSMDQFNNSSTAKVFFGS
IKACGEGISLVGASRVILLDVHLNPSVSRQAIGRAFRPGQKKKVFVYRLVASSSPEEEDH
STCFQKELIAKMWFDWNEYCGYRDFGVETIDVNECGDLFLESAVFREDIKVLYKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaccacttgatctaacgcctattaaaacatcttacgatggtttgtattccaag
gggtataagaggatgaaagtatgttttgatacaaatgattatgatagcatggacttctct
ccaagtaaccatgatgaagctgtacataagaagcctaagtctacttcagaagttgttgat
tacagtgatccatttgccataccggacttgctggagaggatagactctggcaaatatgga
agtgttacaaaggagatagaggcaattcttgctcgaaagaggcaaactctgagcccttat
tttgaaaaatatcctgcactgtcaaatctatccttggaggagaaaaggcagagtaaaagg
gctcctaaatctgcaaaccaacaggctagtccattggcccaaaataatgtcattgatttg
gaggatgactctgttgaaaataatgctccagcagcattattgcctgttgtaattattgat
tcagatgaggaacaaagtgaacatccgagacctccttatcctttcaaagaggttgtcttg
ccagaaccatcctattctttccgggaggttttcttgggacaaccatctgaacagtcagtg
gtaagggactttgttgagaacaaagttccaggagagaccgaaatcaagaatgacccagga
gtttatgttggtgtagaagatgatgacaatcaccagactgatactgaagaagatgatggg
ttgggagatatttggaatgaaatgtcaatggcattagaatctaacaaggatgttgttgtg
gacccttcatctgaagggatgagtgacggcggggaggactgtgactgtgatcattctttt
gtcttaaaggatgatcttggatatgtttgccgcatttgtggggttattgacagaggaatt
gagaccatatttgagtttcagtttaacaaggtcaaaaggagtacaagaacttacatgcct
gattctcggaatgccaaagacagagaggcagctgagataagtggagttaaattgtcagag
gatggtttgataataactgaaatctctgcccacccaagacatatgaagcaaatgaaacct
catcaagtggagggtttcaattttcttgttagtaacttggtgggtgataatcctgggggt
tgcatcttggcccatgctccaggatctggtaaaacatttatgataattagtttcatgcaa
agttttctagccaagtatccaaatgctagaccgcttattgtgcttcctaaaggaatcttg
gatacatggaaaaaggagtttaaaatttggcaagtagaggatattccattatatgatttc
tatgaatccaaagcagacaatcgatcacagcagctggaggtgttgaaacagtgggtggag
cagaaaagtatccttttcttagggtacaagcagttctcctctattgtttgcgatcgagaa
actagcaagatatcagctatgtgccaggagatattgctaaaggcaccttcaattctgatt
ctggatgaggggcacactccaagaaatgataacactgatgtgttccaatcccttaccaaa
ttacagacacctaggaaagttgtactttccggaaccatttttcaaaatcatgtcaacgaa
gtattcaatcttttgaatcttgttcgtcctaaatttttaagatcagaaacttcgcgaccc
atcattaagcgcatcatgagtagagttcatatatcgggtgtaaggaagcagttcaaagct
ggtagtgaatcagctttctatgaactagtggaacatactctacaaaaggataatgatttc
agaaggaaagtgactgtcatacatgagttgcgtgagatgactagcaaggtgcttcattat
tatagaggagactccctagatgaacttcctgggcttgttgatttcactgtgctactaaat
ctcacccccaggcagaagcatgagactgagaaactgaagaagttcgcaaggaagttcaag
caaagttctgttgggagtgctgtttatctgcacccaaaattgtactccttttcttggaaa
cccgctgatccagatgataaagtggatgagctcttggacaaaatggatgtgaaagatgga
gtcaaggcaagattcttccttaatctactgaacttatgtgagtcagctggtgagaaactt
ttggtgttcagtcagtacctcctaccattgaaatttttggagagattagtagccaaaatg
aagggttggagtcctgggagagaaatgtttatgatctcaggtgagtcaagctccgagcaa
cgggaatggtccatggatcaatttaacaattcctctactgctaaggtcttctttggctca
attaaggcatgtggagagggtatatctctggtaggggcatctcgagtcatacttctggat
gtccatcttaatccctcagtgagccggcaagcaattggccgtgcatttagaccaggtcaa
aagaagaaagtgtttgtgtatagattggtagcttctagttcccctgaagaggaagatcat
agcacttgcttccagaaagaactaattgccaaaatgtggtttgactggaatgagtattgt
ggttatcgggattttggagtggagaccattgatgtgaatgaatgtggtgatctcttcctc
gaaagtgcagtgttcagggaagatataaaggttctttacaaaaggtag
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