KEGG   Prunus avium (sweet cherry): 110768566
Entry
110768566         CDS       T05161                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110768566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110768566
   03041 Spliceosome [BR:pavi03041]
    110768566
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110768566
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110768566
Spliceosome [BR:pavi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110768566
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 110768566
NCBI-ProteinID: XP_021828031
UniProt: A0A6P5TM25
LinkDB
Position
Unknown
AA seq 500 aa
MGRKRKLDSNNTESSEPSKKQQPVVEEEEPKPQNEPAEEVVEEEEEEEVEEEEEEEDEPE
EEKEDEGEGEEEEEDEDEEEPGVEYKQNENVTTTSTSAASDLADDGADEDEPIQNLLEPF
SKDQLIALLREAADTHGDVSDRIRKVADEDPIHRKIFVHGLGWDTNAETLTSVFEEYGEI
EDCKAVCDKVSGKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLAAIGPGPAPSAA
AAVPVAVQAAQSQTVSEYTQRKIYVSNVGADLEPQKLMMFFSRFGEIEEGPLGLDKMTGR
PKGFCLFVYKSPESAKRALEEPHKNFEGHILHCQKAIDGPKPVKSQHPNQHHHKSHNSKF
QRNENPGYVGGAAAGMGHLMAPASGGIGFNQGAAAAQALNPALGQALTALFATQGAGLGL
TNLLGTFGTAPNVNPGVPGAGHAIQGGYANQASISPGMMGSYGNQGAMQGGYPNPQIGQG
GSGRGQHGVGQSGGAPYLGH
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggggagaaaacgaaagctcgactccaacaacaccgagtcctccgagccctccaagaaa
caacaaccggtcgttgaagaagaggaacccaaaccccaaaacgaaccagcagaggaagta
gtcgaagaagaagaagaggaagaagttgaagaagaagaagaggaggaagatgaaccggaa
gaagaaaaagaagatgaaggagaaggagaggaagaggaagaggacgaggatgaagaagaa
cctggtgttgagtataagcaaaacgagaacgtgacgacgacgtccacgtcggcagcttcg
gatctggccgatgacggtgccgacgaggacgagccgatccagaatcttctagaacccttc
agcaaggaccagcttattgccctgctccgcgaagcagccgatacgcacggtgacgtatct
gatcggatccgtaaagttgcagatgaggacccgatccaccgcaagatcttcgtccacggg
ctcggatgggacaccaacgccgaaaccctaaccagcgtgtttgaggagtacggtgagatt
gaggattgcaaggctgtgtgcgataaggtctctggtaagtccaaaggttatggcttcatt
cttttcaagacccgttctggggctcgaaaagccctgaagcagccgcagaagaagatcggc
aatcggatgactgcgtgccagctggcggctattggcccaggtccggctccaagtgctgcc
gccgctgtgcctgtggcggtccaggcggcccagtcacagacagtgtcggagtacacgcag
aggaagatctatgtgagcaatgttggggctgacttggaaccccagaagctgatgatgttc
ttttctaggtttggagaaattgaggaagggccactggggcttgataagatgactgggagg
cctaaagggttttgtttgtttgtgtataagtcgccagagagtgcaaagagggcattggaa
gagccgcacaagaattttgagggccacattttgcattgccagaaggctattgacggtcca
aagccggtcaagtctcagcacccgaaccagcaccaccacaaatcccataattccaagttt
cagaggaatgagaatccgggttatgttggtggagctgcggcaggaatggggcatttgatg
gcgccagcaagtggtgggattgggtttaaccagggtgctgcggccgcccaggcattgaat
ccggcacttgggcaggcactgactgcattgtttgcaactcagggggctggtttggggctg
acaaaccttttgggaacttttggaacggctccgaatgtgaatccgggtgttcctggtgca
ggacatgccatacagggtgggtatgcgaatcaggcaagtataagccctggaatgatggga
agctatggaaatcaaggtgcaatgcaaggtggctacccgaacccgcagatagggcaaggt
ggttcaggaagagggcagcatggtgttgggcaatctggcggcgctccttacttggggcat
tag

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