Prunus avium (sweet cherry): 110768718 Help Entry 110768718         CDS       T05161                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism pavi  Prunus avium (sweet cherry) Pathway pavi03018   RNA degradation Brite KEGG Orthology (KO) [BR:pavi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     110768718  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pavi03019]     110768718 Messenger RNA biogenesis [BR:pavi03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      110768718   mRNA degradation factors    5'-3' decay     Decapping complex      110768718 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  110768718 NCBI-ProteinID:  XP_021828252 UniProt:  A0A6P5TMB5 LinkDB All DBs Position Unknown AA seq 808 aa AA seqDB search MERSNGADFRDFLESSSGSSDNKLFDASQYEFFGQKLVEEVELGGLEDEEDRKPLFGPVD NEYHLFEKDEGLGLGSLSDVDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSAAD WAQDGDISNWLDQHMFDTESSQEGKRWSSQPQPSSARFSESKQPKPLYRTSSYPEQQPVQ HHFTSEPILMPKSTFTSFPPPGNRSQQGSPHHQLNISTLAGGSQLPFSAPNLSPLSNSNL LMAGLPHGLHYGGNMPQFTNPGLPFNSRAQNHWATHSGVLHGDHSSIINNILQQQHPHQN GLLSPQLLSAQQQLQQQRLHHSVQPSLAHFAAMQSQLYSTHPSPSHKGMHGLSDTRDHRP KHRGKQRYSQGSDAGSQKSESGWIQFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQ ASLSKKSAGSRSKHPFCPSHLREFPSRGRNSSDQHTHSSVDSLGRIPLSSIRRPRPLLEV DPPSGSGDGEQASEKPLEQEPMLAARIAVEDGLCLLLDVDDIDRLIQHGQPQDGGVQLRR RRQILLEGLASSLQLVDPLGKGSQAVGLAPKDDLVFLRLVSLPKGRKFISRFIQLLFPGS ELARIVCMTIFRHLRFLFGGLPSDSGAAETTTNLAKTVSTCINGMDLRALSACLVAVVCS SEQPPLRPLGSPSGDGATIILKSVLERATEILSDPHAAGNCSRPNRALWQASFDEFFGLL TKYCLSKYETIVQTIFTQPQQSTEVIGSEATKAIHREMPVELLRASLPHTDERQRKLLSD FAQRSMPISGLNAHGGGGGQMNSESVRG NT seq 2427 nt NT seq  +upstreamnt  +downstreamnt atggagagatctaatggcgcagattttagggactttcttgagagttcctcaggttcctca gataataaactctttgatgcctcacaatacgaatttttcggtcaaaaattggtggaagaa gttgagttggggggtttggaagatgaggaagacagaaaacctttatttggccctgttgat aatgagtaccatttatttgagaaggatgagggtctaggtttgggatctttatctgacgtg gatgatttggcaagtacttttgcaaagttgaacaaagttgtaacgggaccaagacatcca ggagttataggagacagaggttctggatccttttcacgggaaagttcatctgctgctgat tgggcccaagatggagatatcagtaactggttagatcagcatatgtttgatacagaaagt tcccaggaaggtaagaggtggtcgtcacagccccagccttcttctgcccgattttccgaa tcaaaacagccaaaacctttgtacagaacatcctcataccccgagcagcagccagtccag catcacttcaccagtgaaccaattttaatgcccaaatcaacgttcacatcattcccacct cctggaaacaggtcccagcagggttcaccacaccaccagctgaatatttctactcttgct ggtggttcccagttgcccttttctgctccaaacctttctcctttatctaactctaatctt cttatggctggtttacctcatgggttgcattatggagggaacatgcctcagtttaccaac cctggccttcctttcaatagcagggcacaaaatcattgggccacccattctggagtattg catggggatcattccagcatcataaacaatatactgcagcaacagcaccctcatcaaaat ggacttctgtccccacaattactgtcagctcagcagcagttacaacagcagagattgcac cattcggttcagccgtctttggcccattttgcagcaatgcagtctcaactttatagtacc catccttctccatcacataagggaatgcatgggttgtctgacacaagagatcatagacct aaacatagaggaaaacagcgttattctcaaggctctgatgctggtagtcagaaaagtgag agtgggtggatccagttcaggtctaagcacatgacatctgaagagatagagagtattctt aagatgcagcatgctgcgacacatagcaacgacccctatatcgatgattattaccatcag gcaagtctttctaaaaaatcagctggttcgcggtcaaaacaccctttctgcccatctcat ctgagagagttcccttcccgaggtcgtaatagtagtgatcagcatactcatagttctgtt gattctcttgggagaatccccctatcttccatacgtaggcctcgccccctccttgaagtt gaccctccctctggttctggtgatggagaacaggcctctgagaagcctttggagcaggaa ccaatgcttgctgctagaattgctgttgaggatggcctttgtctcctccttgatgttgat gatattgatcgacttatacaacatggtcagccccaagatggtggggttcaactcaggcga aggaggcaaatcttgttagaagggttggcatcatcacttcagcttgttgacccacttggt aaaggcagccaagcagttgggctggctccaaaggatgaccttgtgttcctacggttagtg tctcttcctaagggccgaaaattcatttctaggtttattcagcttctcttccctggtagt gagcttgcccgtattgtctgtatgacaatattccggcatttaaggtttttgtttggtggc ctaccatctgattctggagccgctgagacaactactaatcttgcaaagacagtttctaca tgcattaatggtatggatcttcgtgcactaagtgcttgtctcgttgcagtagtttgttca tcagagcagccaccactccgacctcttgggagcccttctggagatggggccactattatt ctaaaatctgttcttgaaagggcaaccgaaatcttaagtgaccctcacgctgctggaaac tgcagcaggcctaaccgtgccctttggcaggcatcctttgatgaattctttggtcttctt accaagtattgcttgagtaaatacgaaactatagtacaaacaatatttacacagcctcag caaagcacagaagttattggttcagaggctaccaaggcaatccatcgtgaaatgcctgtg gagcttctacgtgcaagtcttcctcacactgatgagcgtcaacggaagcttttgtcagat tttgctcaaaggtcaatgcctatatctggtcttaatgcccacggtgggggtggaggtcaa atgaactctgaatcagtgaggggatag

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