Prunus avium (sweet cherry): 110768811
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Entry
110768811 CDS
T05161
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110768811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110768811
03036 Chromosome and associated proteins [BR:
pavi03036
]
110768811
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
110768811
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
110768811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_RIG_1st
RMC1_N
Beta-prop_WDR75_1st
WDR54
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
110768811
NCBI-ProteinID:
XP_021828361
UniProt:
A0A6P5TN02
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MRYRCPLEERLLQKRNSRENLDRFIPNRSAMDFDFAHYMLTQGRKDKENSSRYGKDYRKQ
LAEAMNMNRTRILAFKNKPPPPVELFPSNFSSLPQDKTANSKPQRHIPQTPETTLDAPHL
IDDYYLNLLDWGSSNVIAIALADTVYLWDATDHSTSEAVTFEVEMGPVTSVSWAVDGSHI
AVGLDNSEVQLWDSTTKQYLRTLRGCHRSRVGSLAWNNHILTTGGMDGRIVNNDVRIRSH
IVNTYRGHEREVCGLKWSASGQQLASGGNDNLLHIWDNRSVAPSQWLHRLEDHTAAVKAL
AWCPFQRNLLASGGGGNDRCIKFWNTHTGACLNSVDTGSQVCALLWNMNERELLSSHGFT
RNQLTLWKYPSMVRIAELTGHTSRVLHMAQSPNGCTVASAAGETLNFWNVFGDPEEVKPA
PKEPFAHVNRIR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaggtataggtgccctcttgaagaacggcttcttcagaaaaggaattctcgggaaaat
ttggacaggttcataccaaataggtctgcaatggattttgattttgcgcattacatgctt
actcaaggtaggaaagataaggaaaactcatctagatatggaaaagactataggaagcag
ttggcagaggctatgaacatgaatcgcactagaatcctcgctttcaagaacaagcctcct
ccccctgtagagctcttcccgagcaacttctcttctttgccacaggataaaacggcaaac
tctaagccacagagacacattcctcaaactccagagacaacactggatgctcctcacctt
attgatgattattacctgaatttgttggattggggaagctccaatgttatcgcaatagct
cttgcagacacagtttatttgtgggatgctactgatcattctacttcggaagcagtcaca
tttgaggttgaaatgggacctgttaccagtgtcagttgggctgttgatggaagtcacatt
gccgttggactggataattccgaagtacagctatgggattcaactactaagcagtatctg
agaaccttgagaggttgtcacagatcacgagtaggctcactagcatggaacaatcacatt
cttactactggaggaatggatggccgcattgtaaacaatgatgtaagaattagatcgcac
attgtcaatacatacagaggacatgaacgagaggtttgtgggcttaagtggtcggcctca
ggccagcaattagcaagtggaggaaatgataacctgctccatatatgggacaacagatca
gtggcaccatcacagtggcttcacaggcttgaagaccatacagctgctgtaaaagccctt
gcttggtgtcctttccagagaaatttgctagcttctggtggaggtgggaatgatcggtgc
ataaagttctggaacactcacacaggtgcatgcctgaactcggtcgacactggctctcag
gtctgtgctttgctgtggaatatgaatgaacgagaactgcttagctcacatgggtttact
cggaatcagcttactctttggaaatacccatcaatggttagaattgcagaactcacgggt
catacgtctagagtccttcatatggctcagagcccaaatggttgcacagtagcatcagca
gctggtgaaacactgaacttctggaatgtttttggggaccctgaggaggttaaacctgct
cccaaagagccttttgcccatgtgaatcgtatccgctga
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