KEGG   Prunus avium (sweet cherry): 110768885
Entry
110768885         CDS       T05161                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110768885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110768885
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110768885
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110768885
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 110768885
NCBI-ProteinID: XP_021828447
UniProt: A0A6P5TMW6
LinkDB
Position
Unknown
AA seq 128 aa
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL
YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcgggccccgaagatgtctacctctccacttctcttgccagctatcttgac
aaaaaacttcttgtgctgctccgagatggtcggaagcttttggggattcttcgttctttt
gatcaatttgccaatgctgttctagagggtgcatgtgagcgagtcattgtcggtgaactt
tactgtgacatccctttaggtctttatgtaatccgtggggagaatgttgttctaattggc
gagctggattcagagagagaggaactcccaccacacatgactcgtgtttcagctgcagaa
atcaaaagtgcacagaaagcagaacgagaagcgtctgatcttaaaggtaccatgagaaaa
agaatggagttcctcgacatggattaa

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