Prunus avium (sweet cherry): 110768971
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Entry
110768971 CDS
T05161
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110768971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110768971
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
110768971
SWR1 complex
110768971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Myb_DNA-bind_6
DBINO
ETC_C1_NDUFA5
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110768971
NCBI-ProteinID:
XP_021828551
UniProt:
A0A6P5TNJ0
LinkDB
All DBs
Position
Unknown
AA seq
2123 aa
AA seq
DB search
MASKGPRSKLDHETRAKRHKALEAPNEPRRPKAHWDHVLEEMIWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKRMKEEELRLKKVALSISKDVKKFWLKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLGDSYKPVQQYPIQNQLSIQCKEMDENDINKS
TEFNADPQSDTVDGDDDYDVQSDDGTEDDECTIEEDEALFTEQERQEELAALQNEVDLPL
EELLKQYPIEKVSPESSPEKGEDVTEMASVGEDHGICPEKGDDSAEMTSVGQDPGTCSEK
VEDDAEMTSVGEDPVMCPEKVEDGAEMTSVGEGHGGQSDIFVANKTEKISSDSFTGRRCV
ESNGGLSTSETHLSDIEINGAKNISEASAQLAKGHVRYDFNDEHEDGDFILAAGEEKDDE
TTLSEEEELARADTSDPMDEIALLQKESEVPLEELLARYKKDSNSDEVADGESEYASALS
EGFVDSPSLEDVEPKQPGVCMDEDVDSGEHQPALDSPTEEQSARIDKISEGGKDSENRLE
DAAAAARSAQPTGNTFSTTQVRTKFPFLLKFPLREYQHIGLDWLVTMYEKRLNGILADEM
GLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKER
KLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF
NSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGQEKVNKEV
LDRLHNVLRPFILRRLKRDVEKQLPMKHEHVINCRLSRRQRNLYEDFIASSETQATLASA
NFFGMISIIMQLRKVCNHPDLFEGRPIVSSYDMAGIYTQLSSSVCSILSPGPFSAVDLRG
LGFLFTHLDFTMTSWESDEAKALATPSSSIKERVELTNLEYIGGFKHRKKLHGTNIFEEV
HKAIMEERLRQAKEHAAATAWWNNLRCNRKPIYSTSLRDLVTVRHPVFDIHSHKANPLSY
MYSSKLADIVLSPVERFQKMIDLVESFLFAIPAARAPPPVCWCSKSGSSLFQNPVYKQKC
SETLSPLLSPLRPAIVRRQVYFPDRRLIQFDCGKLQELAGLLRKLKSEGHRALIFTQMTK
MLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGA
DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISQSTIEENILKKANQKRALDDLV
IQSGGYNTEFFKKLDPMELFSGHRALPVKNLQKEKNHNTTEVSLSNADLEAALKHAEDEA
DYMALKKVEQEEAVDNQEFTEEAIVRLEDDELVNEDDMKVDEPVEQGGWTTSSNKENGIT
LNGSDSNDERALTVACREDDVDMLDDVKQMAAAAGQEISSFGNQLRPIDRYAIRFLELWD
PIIDKTAVESQVRFEETEWELERIEKYKEEMEAEIDEDEEPLVYETWDADFATEAYRQQV
EALTQHQLMEELEYEAKVKEDEADENCDSMKNEMPSDPKPKPKKKSKKAKFKSLKKRSLA
SELKPVKGDLQVEPMSIDEDSISYEMVTYSDMESPRSSVKRKRKKAESRPFGEEKTSKKK
SKKLKKSTLEICPSEFDTNLSTMEHDEVTESKPCESVVDFEHKPVSRSKMGGKISITSMP
VKRVLMIKPEKLKKGNIWSRDCIPPPDFWLSQEDAILCAVVHEYGPYWSLVSDILYGMTA
GGFYRGRYRHPVHCCERFRELIQRYVLSTPDNPNYEKVNNIGSGKALLRVTEDNIRMLLN
VAAEQPNREFVIQKHFTALLSSVWKVTSRKDRRKNLPSSWNGLYFGGNFFSSSNQISQTS
MKERTERMKLSTFGHGTKLIAAALNDASSRQEDGRAFRPNLGKDSSTDAERLDITLEFQG
GKDDSMDELPSVINLSVSDSDPLPLLSQAPEDHHLRNSSNDQCEDSCDVNLAENRFRTAT
RTCIEDTMGWAASAFPTNDIRSRSVSKLPTTGKHKLAFSDSVRPSKSKIRKSSVEHGETR
SFISEQVFQPLPMAAPMNPIPRFDLNMPVNEDVGIDDLEDNSCSYIDESLLEMEDFGVLP
HEYVPGLIGDLDDELLPEYIDIG
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaaggtccaaggtcgaagcttgatcatgagaccagagctaaacgccacaag
gcccttgaagctccgaatgaacctcgtcggccaaaggctcattgggatcatgttttagag
gagatgatatggctttcaaaggactttgagtcagagagaaaatggaaattagctcaggcg
aagaaggttgctttaagagccagcaaaggcatgctagatcaagctacgaggggagaaaag
agaatgaaggaagaagagctgcggttaaagaaggttgccctcagtatttcaaaagatgtg
aagaagttctggctgaaaatagagaagctggtgctttacaagcatcagatggaacttgat
gagaaaaagaaaaaggcacttgataagcagcttgagttccttctagggcaaactgagagg
tactcaacaatgttggcagaaaatctcggggacagttacaagcctgtgcagcaatatccc
atacaaaatcaactgagtattcaatgcaaagagatggatgaaaatgatattaacaaatca
actgaatttaatgccgatcctcagtcagatacagtagacggtgatgatgattatgatgta
caatcagatgatggaacagaagatgatgagtgcactattgaggaagatgaggctcttttt
actgaacaagaaagacaggaagaattggctgctttacaaaatgaagtagatcttccactt
gaggagttactcaaacaatatcctattgagaaagttagcccagaaagtagtccagaaaag
ggtgaagacgtcactgaaatggcctcagtaggggaagatcatggtatttgtccagaaaag
ggtgatgatagtgcagaaatgacttcagtggggcaagatcctggtacgtgttctgaaaag
gttgaagatgacgcagaaatgacctcagttggggaagatcctgttatgtgtcctgaaaag
gttgaagatggcgcagaaatgacctcagtgggggaaggccatggtggacaaagcgatatt
tttgtagccaataagactgaaaaaataagctcagacagtttcaccggtcgtcgttgtgtg
gaaagtaatggtggcttgtccacttcagaaacccatttatcagatattgagataaatgga
gccaaaaatatttcagaagcttctgcacagcttgccaagggacatgtgcgatatgatttt
aatgatgaacatgaagatggtgacttcattcttgctgctggagaggaaaaggatgatgag
acaactttatcagaggaggaggaactggcaagagcagataccagtgatcccatggatgag
attgccttactacagaaggagagtgaagttcctttagaggaactgcttgcaaggtataaa
aaggattcaaacagtgatgaagttgcagatggtgaatctgaatatgcctctgctttatca
gagggatttgtggattctccgtctcttgaagatgttgaaccaaagcaacctggtgtttgt
atggatgaagatgttgactctggtgagcaccagccggctcttgattctcctactgaagaa
cagagtgctaggatagataagatatcagaaggaggaaaggacagtgagaacagacttgag
gatgcagccgctgctgcgagatctgcacaaccaactggaaacaccttctccacaacccaa
gttcgcacaaagttcccttttcttcttaagttccctctacgtgaatatcagcatattggc
ttggattggcttgtaacgatgtacgagaaaagactgaatgggattttagccgacgagatg
gggcttgggaagacaatcatgacaattgctttgcttgcacacctagcatgtgaaaaggga
atatggggtcctcatcttattgtggtcccaactagtgttatgcttaattgggagactgag
tttctcaaatggtgtccagctttcaaaatcttaacttattttggaagtgcaaaagagcgc
aaattgaaaaggcaaggctggttgaaaccaaactcatttcatgtatgcataacaacatac
agactggttattcaagattcaaaagtcttcaagcgtaagaagtggaaatacttgatttta
gatgaagcccatctgattaaaaattggaagtcacagagatggcaaactcttttaaacttc
aattctaaacgccgcattttgttaaccggtactcctctgcagaatgatctcatggaactt
tggtctctaatgcatttcttgatgccccatgtatttcagtcccatcaggaattcaaggat
tggttctgtaatcctatatcagggatggttgaggggcaagaaaaagtgaataaagaagtt
cttgatcgtctacataatgtccttcggccattcattctccgtcgtttaaaacgagacgtg
gagaagcagctccctatgaaacatgagcatgtgataaactgtagactctccaggaggcag
cgtaacttgtatgaagacttcattgctagctccgaaacacaagcaactcttgcaagtgcc
aatttttttggaatgataagtattataatgcagcttcgtaaagtatgcaatcatcccgac
ttatttgaaggtcgtccgattgtcagttcctatgatatggctggtatttacacacaattg
agttcttctgtatgttcaattctttcacctggacccttttctgcagtagaccttaggggt
ttggggtttttatttactcatctagattttaccatgacttcttgggagagtgatgaagct
aaagctcttgctactccatcaagttcaatcaaggagcgtgttgaactgactaaccttgaa
tatattggtggatttaaacatcgcaagaagttgcatggtacaaatatttttgaagaggtt
cataaggcaattatggaggagagactaagacaagcgaaggaacatgctgcagctactgca
tggtggaataacttgaggtgcaacagaaagcccatatactcaacaagcctaagggatctt
gttacagtaagacatcctgtttttgatattcactctcacaaggctaatcctttgtcctac
atgtactcctcaaagctggctgatatagtcctttcaccagtggaacgctttcagaaaatg
attgacctggttgaaagttttttgtttgcaatccctgctgctcgggcgcccccacctgta
tgttggtgcagtaagtctggaagttctttgtttcagaatccagtttataagcagaaatgc
tctgaaaccttgtcaccacttctatcaccactcagacctgcaattgtccgaaggcaagta
tattttcctgacaggcgacttatacagtttgactgtggtaagttgcaagagcttgcaggt
ttgcttagaaaactgaagtcagaaggtcacagagcattaatattcactcagatgacgaag
atgcttgatatcttggaggctttcatcaatctgtatggttacacatacatgcgtttagat
gggtccactcagcctgaggagaggcagactttaatgcagcggtttaacacaaatcccaaa
atttttcttttcatattgtcaacccgtagtgggggtgttggaataaacctagttggggca
gatactgttatcttttatgatagtgactggaatcctgctatggaccaacaagctcaagat
cgatgccaccgtattggacagacacgtgaagttcatatttatcggttgatcagtcagagc
actattgaagaaaatatcctgaagaaagcaaatcagaagcgtgcacttgatgatctagtt
atacaaagtgggggatacaacactgaattcttcaaaaagcttgatcctatggagcttttc
tctggtcatagggcacttcctgttaagaatttgcaaaaggagaaaaatcacaacacaact
gaggtttctctatcaaatgctgatctcgaagctgctctaaagcatgcagaagatgaagct
gattacatggcattaaagaaagttgagcaggaggaagctgttgacaatcaagaatttaca
gaagaagccattgtgagattggaagatgatgaattagtaaatgaggacgacatgaaggtt
gatgaacctgttgagcagggtggctggacgacctcttcaaacaaagaaaatggaataacg
ttgaatgggagtgattctaatgatgaaagagctcttactgttgcttgtagagaagatgat
gtggacatgctggatgatgtcaaacagatggctgcagcagcaggacaagaaatctcatca
tttggcaatcaattacgtccaatagataggtatgcaattcgttttctggaattgtgggac
ccaattatagacaaaacagcagtggaatctcaggttagatttgaggagacagaatgggaa
ctagaacgcattgaaaaatacaaggaggaaatggaagctgagattgatgaagatgaggaa
cctcttgtatatgaaacatgggacgctgattttgcaactgaggcatatcgtcagcaggtt
gaggctttgactcagcatcagttgatggaggaactggaatatgaagccaaggtgaaggaa
gatgaagcggacgaaaattgtgattctatgaagaatgagatgccaagtgatcctaaaccc
aagcctaagaagaaatcgaagaaagccaaatttaaatctctgaagaaacgatctctagcg
tctgaactgaaacctgtgaaaggagatcttcaagtggaacctatgtccatagatgaagac
tccatctcttatgagatggttacctattccgatatggaatcaccacgttcaagtgtcaag
agaaaacgtaagaaggctgaatctagaccatttggtgaagagaagacttcaaagaaaaaa
tcaaagaaactcaagaagtctactcttgaaatttgtccttcagagttcgatactaacctc
tctacaatggagcatgatgaagttacagagtcaaaaccatgtgagagtgtggttgatttt
gagcataaaccagttagcagaagcaagatgggagggaaaatatctatcacttccatgcct
gtaaagcgtgttctcatgataaaaccagagaagttaaagaagggcaacatttggtcgaga
gattgtattccaccaccagatttttggttgtcacaagaggatgcgatattatgtgctgtt
gtacatgagtatggtccttattggagcttggttagtgatatactttatggaatgacagct
ggtgggttttataggggaagatatcgccatcctgtccattgctgtgagagatttcgggaa
ctcatccaaagatatgttttgtctacaccagacaatcctaattatgaaaaagtaaataat
ataggatctggaaaggctcttctaagagtaacagaggataatattcgaatgttattaaat
gttgctgccgagcagcccaatagagagtttgtcattcagaaacacttcactgccctgctt
tcatctgtctggaaggtgacatctcgcaaagatcgccgaaaaaatctcccatcatcctgg
aatggtctatattttggtggaaacttttttagttcctctaaccaaatttctcagacttcc
atgaaggaacgtacagaaagaatgaagttgagcacttttgggcacggtaccaagttgata
gctgctgcacttaatgatgccagcagcaggcaggaggatggcagagcatttcgtcccaac
ctggggaaagattcatcaacggatgcagagcggttggatataactttagaatttcaggga
gggaaagatgactccatggatgaattgccctctgttataaatttgtcagtatccgattca
gaccctttgcccttgttaagtcaagctccagaagatcatcatcttcgaaactccagcaat
gatcagtgcgaagactcctgtgatgtaaatttagctgagaaccgtttcaggactgcaaca
agaacttgcattgaagataccatggggtgggctgcatctgcattcccaacaaatgatatc
aggtctcggtcagtgtcaaagctaccgaccacgggaaagcacaaacttgccttctctgat
tcagttagaccttccaaatcgaagatcagaaaaagttcagtagagcatggtgagacgcgt
agctttatttctgagcaggtattccaacctttgccaatggctgcacccatgaatcccatt
ccaaggtttgacctgaacatgcctgtcaacgaggatgttggaattgatgatttggaagac
aattcttgttcttacattgacgagtctttgttggaaatggaggactttggagttctccca
catgaatatgttcctggcttgattggagaccttgatgatgaactattgccagaatatatt
gacattgggtaa
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integrated database retrieval system
