Prunus avium (sweet cherry): 110769525
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Entry
110769525 CDS
T05161
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110769525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110769525
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110769525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
110769525
NCBI-ProteinID:
XP_021829219
UniProt:
A0A6P5TQH5
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MFGAQASSSPFGLSSSTSVFGTPSSTSAFGTPSSTPAFGMPSSTPAFGTPSSTPSFFTPS
TPAFGTPSSSSFSTGGFGGSFFATPFSSQTQQQQQQQQQTPSFQQPQSAGGFGFQSPFTS
PQQPTPFPNSQLTTQMAPVAPLPFSLADRDIQAIVDAYKDEPGNPKYAFKHLLFSVTDPQ
FRVKPAGVSDIMWAEAMGKLEGLESTDRERLWPQLVQGFKDLSQRLKLQDEVLLSDAERL
QMTQSNVKMLQRHFQADTLPWIERMRQKEQGLQRRLLRVMRLLEALEGKGFRLPLMKGEA
ELAEKLAAITRQLKGSGAELSRRVQNLVTISRVQENAIGAGGLVCLPGSTKIHEQSLADM
QEVLQQQTEAIARLGNVLKRDIRDMEIIMAEETETTENMIMS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaagcttcctcttctcctttcggcctgtcatcgtcaacctcagtcttc
ggaacgccgtcgtcaacctcggccttcgggacgccgtcgtcaaccccggccttcgggatg
ccatcgtcaaccccagccttcggcacgccgtcttcaaccccaagcttcttcactccttcg
accccagcctttggaactccgtcgtcgtcttcattttccactggtggctttggcggctcc
ttcttcgccactccattctcttctcaaactcaacagcaacaacagcaacaacagcagacg
ccgtcgtttcaacaacctcagtctgctggtggctttgggtttcagagtccgttcacttcg
ccacagcagccgactcccttccctaattctcaattgactactcagatggctcctgttgct
cctctccccttctctctcgccgatcgtgatattcaagcaattgttgacgcttacaaggat
gagcctggaaaccctaaatatgcttttaagcatttgctgtttagtgtaaccgatccgcag
ttcagggtgaagcctgctggtgtatcagatataatgtgggcagaggctatggggaagctt
gaaggtctggaaagtactgacagggaacgcctgtggcctcagcttgttcagggttttaaa
gatctttcgcaacgcttgaagctccaagatgaagtccttctttcagatgctgagagattg
caaatgacccaaagcaatgtcaagatgcttcaaaggcattttcaagctgacactcttcct
tggatcgaaagaatgagacaaaaagaacaaggtcttcaaaggcgccttttgagggtgatg
agactactggaggcacttgagggcaagggttttcggctgcctttaatgaaaggtgaagca
gaattggctgagaagttagctgcaattactagacagttgaaaggatcgggagctgagcta
tctaggagggtacaaaacctggtaaccatatcccgtgtccaagaaaatgctattggtgct
ggtggtttagtctgtcttccaggatcaaccaaaatacatgaacagagtcttgctgatatg
caagaggtcttacaacagcagacagaagccattgcaagactgggcaatgttttgaagcgc
gatattagggacatggagattataatggccgaggagacagaaactacggagaatatgatt
atgagctaa
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