Prunus avium (sweet cherry): 110769887
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Entry
110769887 CDS
T05161
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03015
mRNA surveillance pathway
pavi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110769887
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110769887
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pavi01009
]
110769887
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110769887
03036 Chromosome and associated proteins [BR:
pavi03036
]
110769887
Protein phosphatases and associated proteins [BR:
pavi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110769887
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110769887
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110769887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
110769887
NCBI-ProteinID:
XP_021829629
UniProt:
A0A6P5TRS5
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MNGGDEVVAAPGGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDTKDNGGTRRDLERMDYPISRHPEFRYKTEFQSHEPEVFFSHELLIHRHHYY
LLLVSVFKLLILTMCIFFCQFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKFWK
VQEKKVKKISEMNVDPSKAVGNGNLASSSNLGSSKMHLANGGCPDRSFSCLSNDISFPPG
GIPSLRLPQVTSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEI
SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDSHAK
LFEEQEAPGARSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVTTFQVHE
YLRPKLCDLYENDSIFDKFECCLSGDGLRVGTGSYSNLFRVFGCGAGSTEATTLEASKNP
MRRQVPTPSRPSRSLSSSITRVVRRGAENPGVDANGNCFDFTTKLLHLAWHPTENSIACA
AANSLYMYYA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatgaggtcgtcgcagctcccggaggccctccacagcctctggagtgg
aaattctctcaggtattcggcgagcggacggctggtgaagaagttcaggaagttgatatt
atttctgctattgaatttgataaaactggtgaccatcttgctactggtgaccgtgggggc
cgggtggttctatttgaaaggacagatacaaaagataatggtggcaccagaagggatttg
gagaggatggattatccaattagtaggcatcctgagttccgttataaaacagagtttcag
agccatgaacctgaggtattcttttctcatgagttactaatacatcgccatcattattac
ttacttttggtctctgtattcaagttgcttatactcacaatgtgcattttcttttgtcag
tttgactacctgaagagtttggaaatagaggagaaaatcaacaaaatcagatggtgccaa
actgccaatggtgccctgtttctcctatctactaacgataaaacaattaagttttggaag
gtccaagaaaagaaggtcaagaaaatttctgaaatgaatgtggatccttcaaaagctgta
gggaatggcaatcttgctagttcaagtaatttgggtagctctaaaatgcatcttgcaaat
gggggatgcccagacagatcattcagttgtctgagcaatgacatttcatttccaccaggg
ggcattccttcgttacgattgccacaggtaactagccatgagactagcctagttgccaga
tgtcgaagggtatatgctcatgctcatgattatcatatcaattcaatttcaaacaacagt
gatggcgaaacttttatatcggctgatgatctgcgaataaatctttggaacttggaaatt
agcaatcaaagtttcaatattgtggatgtgaagcctgcaaacatggaagatttaaccgag
gtgataacatcagcagagttccaccctacccattgcaatacgttagcctatagcagttcc
aaaggctcgattcgactcattgatttgcggcagtctgctttgtgtgattctcatgctaaa
ttgtttgaggaacaggaagcgcctggtgctagatcattcttcactgagattattgcttca
atctcagatattaagtttggaaaggatggaagatatatacttagccgcgattacatgact
cttaagttatgggacatcaatatggattcaggtcctgtcacaaccttccaggttcatgaa
tatttaagacctaagctgtgtgatttatatgaaaatgattctatcttcgataaattcgag
tgttgtctgagtggtgatggcttgcgagtaggaacgggttcttacagcaatctattccgt
gtatttggttgtggtgctggtagtactgaggcaacaactttggaggccagcaaaaatcca
atgaggcgacaagttccgaccccttctaggccttccaggtccctgagcagtagtataaca
cgagttgtcagacgaggagcagaaaaccctggggttgatgcaaatggaaattgttttgat
ttcacgacaaagttgctgcacttagcatggcatccaactgaaaactcaatagcctgtgct
gctgctaacagcttgtacatgtactatgcataa
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