Prunus avium (sweet cherry): 110770050
Help
Entry
110770050 CDS
T05161
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110770050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110770050
03029 Mitochondrial biogenesis [BR:
pavi03029
]
110770050
Membrane trafficking [BR:
pavi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110770050
Atg1 complex
110770050
Mitochondrial biogenesis [BR:
pavi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110770050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
110770050
NCBI-ProteinID:
XP_021829823
UniProt:
A0A6P5TQN8
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MASSHGNSHSEAAKMEQIITEFYAKSLHIILESRTPYMSSRNFSGEQALSSPSSSSSSSS
SVRPRDKWFNLALRECPAALENLDLWRQSHLEPMVVDVILVQRPLDCEPLKCSPKRDLVR
NFSLKERYPYCWNYEQEEFGCEAKSEKIIERWVVQYDSRKIRDTNSGSRRSSSNTLHSLY
KKSMLLLRSLYVTVRLLPAYKVYRDLNSSGQIRPFALTHRVASFAEPFTCREEAAMQRFG
FTPVDTACGRLCLSVLYCSSLSDVSSESSTPMSPQFIPDYVGSPLTDPLKRFPSLPVTGS
VAHAFPPSSSFSRRHSWSFDHYRASPPSVSFSPSPTYSEPHALISNQSSRFPPTIMPPYP
PETSLVYKKDTSFDEYSPAFSPSPSSASPSLPIFIPGSHHSKPLLQSESAPFSEQTAKLA
NSPAFCNKLNLPLRGIGSGSSKTDKTRGFMEAGTAVEKFSSLGKDDARQYSEVKISSSSS
SRSFPDDLDDSDFPCPFDVDDEDVTDPGSRPESFDKNVPLCEPHVPGGLFPIKKSQDAAV
GALVRMLRKAPPLRQDNSNSVKFSQACRPEIWSNSSQEPNQPSKGQASVQRDDSSSVISS
GLITSKTTTVALEELQSYREMKNLLLGQGSKSHM
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctcatggtaattcccactctgaagcagcaaaaatggaacaaataatcact
gaattctatgccaaaagtctccacatcatccttgaatctaggactccatacatgtcctcg
cgtaattttagtggtgaacaagccctatcatcgccatcatcatcctcatcatcctcatcg
agtgtgaggccgagggataagtggtttaatttagctctaagggaatgtcctgctgcactg
gagaatcttgatctctggcgccagagccatcttgaacctatggtggttgatgtgattttg
gtccagagaccacttgattgtgagcccttgaagtgttcacctaaaagggatcttgttagg
aacttttcattgaaagagcggtatccatactgttggaattatgagcaggaggaatttggg
tgtgaggcaaagagtgaaaagattatagagagatgggtagtgcagtatgacagtcggaag
attagagatacaaattcagggagcaggaggtcgagcagtaatactttacattcattgtat
aagaagtcgatgttacttttgaggtctttgtatgtcactgttaggcttttacctgcttac
aaagtttatcgcgacctcaattcgtcgggccaaattcggccatttgctcttactcaccga
gtagcctcttttgctgagcccttcacttgtagagaagaggcagcaatgcagcggtttggg
ttcacccctgtggatacggcttgtggcaggctttgcctttcagtgttgtattgttcatca
ctttcagatgtaagctctgaatcatcaactcctatgtctccacaatttattccggactat
gttggcagcccattgacagacccacttaaaaggttcccatcacttcctgtgacaggatca
gtagcacatgcctttccaccatcttcctcattctcaaggcgacatagttggagttttgac
cattatagagcttcaccaccttcagtttccttctcaccttcacctacatattcagaacca
catgctttaatttctaaccaaagttctcgtttcccacctacaatcatgccaccttatcca
cctgaaacatctcttgtttataagaaggatacaagctttgatgagtattcgcctgccttt
tcaccctcaccatcgtctgcctctccatcattgccaatctttattcctgggagtcatcat
tcaaagcctcttttacaatctgagagcgcaccattcagtgaacagacggctaaacttgct
aattcccctgcattctgcaacaagctaaatttgcctcttagaggtattggatctggcagt
tctaagactgataaaactaggggttttatggaggctggtactgcggttgagaagttttcc
tcccttgggaaagatgatgctagacaatactctgaggttaaaatatcatccagcagctcc
agtaggtctttccctgacgatttggatgattctgactttccgtgcccatttgatgtggat
gatgaggatgtgacagatccaggtagcagacctgaatcttttgacaaaaatgtacctctg
tgtgagccacatgtgcctggagggttgtttccaattaaaaaatcccaagatgctgctgtt
ggtgcgcttgtacgaatgttaagaaaagctccacctctccgccaggataactcaaattca
gtaaaattttcacaggcctgcaggcccgaaatctggagcaacagtagccaagagcctaat
cagccttctaagggacaggcttcagttcagcgtgatgattcttcaagcgtcatttcctca
gggctcattacatcaaaaactaccactgttgcattagaagagctccaaagttacagggag
atgaaaaatttgttactagggcaaggtagtaagtctcacatgtag
DBGET
integrated database retrieval system