Prunus avium (sweet cherry): 110770211
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Entry
110770211 CDS
T05161
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110770211
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
110770211
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
110770211
NCBI-ProteinID:
XP_021829987
UniProt:
A0A6P5TS87
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MGSKFILGTTFFLFLISFSIKARAADFDIKKYGAKADGKTDDSQAINSAWKEACASTTPS
TVVIAKGNYMAGPVKFQGPCKAPVSVRVEGILQAPAEPEKLKSQDGWVVFRNIDGLTVSG
GGTFDGQGSIAWSKNDCAKTGKCNSLPINIRFIGLTNSHIQDITSLNSKLFHINVLNCKN
VTLQHVIMTAPGKSLNTDGIHIGRSSNINITGAEIKTGDDCVSLGDGSQQINIEKVKCGP
GHGISIGSLGRYHDEQPVTGVTVRNCTISNTSNGVRVKTWPASPNGMASYLHFEDIIMEN
VKTSPILIDQEYCPNGQCQAKIPSKVKISNVSFKNIRGTSADPVVVKLACSKGIPCQNVQ
ISDIHLTYNGKNGVATSVCTNVKPTMTGQIFPPACAKTAALR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaaatttattcttggaactacattctttttgttcttgatatcattttccata
aaagccagagctgcagattttgatatcaagaagtatggagccaaggctgatggtaagaca
gatgatagccaggctattaatagtgcttggaaagaagcatgcgcatccacaactccgagc
acggttgtgatagcaaaaggaaactacatggctggtccggtgaagtttcaagggccctgc
aaagcaccggttagcgttcgggttgaaggaatcttgcaggctccagcagagccagaaaag
ctcaagtcacaagatggttgggttgttttccgaaatattgatgggttaacagtctcagga
ggtggcacttttgatggccaaggatcaatagcttggtccaaaaatgattgtgccaaaact
ggaaaatgcaactcactgcctataaacataagattcatagggctcaccaattcacacatt
caagacataacatctttaaatagcaagctgttccacataaacgtcttgaattgcaaaaat
gtgacacttcaacatgtgatcatgaccgcccctggtaaaagcctaaacacagatggaatc
cacattggccggtcatcgaacatcaacatcaccggcgcagagatcaaaaccggcgacgat
tgcgtctctcttggcgatggaagccagcaaataaacattgaaaaggtgaagtgcgggccg
ggccacggcatcagcattgggagcctaggcaggtaccatgatgaacaacctgtcacagga
gtcacagtgagaaactgcaccatatcaaacacttcaaatggcgtgagggtcaagacatgg
cctgcttctccaaatggtatggcctcatatttgcactttgaggacataattatggaaaat
gtgaagacctcccctattcttatagaccaagaatactgtccaaatggccaatgccaagcg
aaaatcccgtcgaaagttaagataagcaatgtgagctttaagaacattagggggacttct
gctgatcctgttgttgtgaagcttgcttgcagcaaaggcattccatgccagaatgtgcaa
ataagtgacatccatttgacatacaatgggaaaaatggtgttgccacatctgtatgtact
aacgtcaagcccactatgactggccaaatttttcctcctgcttgtgcaaagactgcagct
ttaaggtga
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